Gene : Glyma.15G200100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31065:SF11 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  2001
Name:  ? Glyma.15G200100 Secondary Identifier:  ? PAC:30499542
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G200100 0.5kb upstream 0.5kb upstream 2800 true Chr15: 24336762-24339561 Glycine max
Glyma.15G200100 0.5kb upstream 0.5kb upstream 500 false Chr15: 24339062-24339561 Glycine max
Glyma.15G200100 0.5kb downstream 0.5kb downstream 2800 true Chr15: 24336262-24339061 Glycine max
Glyma.15G200100 0.5kb downstream 0.5kb downstream 500 false Chr15: 24336262-24336761 Glycine max
Glyma.15G200100 1.0kb upstream 1.0kb upstream 3300 true Chr15: 24336762-24340061 Glycine max
Glyma.15G200100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 24339062-24340061 Glycine max
Glyma.15G200100 1.0kb downstream 1.0kb downstream 3300 true Chr15: 24335762-24339061 Glycine max
Glyma.15G200100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 24335762-24336761 Glycine max
Glyma.15G200100 2.0kb upstream 2.0kb upstream 4300 true Chr15: 24336762-24341061 Glycine max
Glyma.15G200100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 24339062-24341061 Glycine max
Glyma.15G200100 2.0kb downstream 2.0kb downstream 4300 true Chr15: 24334762-24339061 Glycine max
Glyma.15G200100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 24334762-24336761 Glycine max
Glyma.15G200100 5.0kb upstream 5.0kb upstream 7300 true Chr15: 24336762-24344061 Glycine max
Glyma.15G200100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 24339062-24344061 Glycine max
Glyma.15G200100 5.0kb downstream 5.0kb downstream 7300 true Chr15: 24331762-24339061 Glycine max
Glyma.15G200100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 24331762-24336761 Glycine max
Glyma.15G200100 10.0kb upstream 10.0kb upstream 12300 true Chr15: 24336762-24349061 Glycine max
Glyma.15G200100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 24339062-24349061 Glycine max
Glyma.15G200100 10.0kb downstream 10.0kb downstream 12300 true Chr15: 24326762-24339061 Glycine max
Glyma.15G200100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 24326762-24336761 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312691 5265 Fabidae View MSA
124068522 5270 Rosid View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.249055 0.0 0.972146    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0895293 0.0 0.362949 Low  
cufflinks 0.0111164 0.0 0.0534479 Low Low
cufflinks 2.36234 0.0 8.11079   High
cufflinks 3.22776 0.0 10.686   High
cufflinks 0.216979 0.0 0.851201    
cufflinks 0.554984 0.0 2.08901    
cufflinks 1.22563 0.0 4.42924    
cufflinks 0.225        
cufflinks 2.061        
cufflinks 0.026     Low  
cufflinks 2.077        
cufflinks 1.937        
cufflinks 0.049     Low  
cufflinks 0.041     Low  
cufflinks 10.775     High High
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 1.995        
cufflinks 0.071     Low  
cufflinks 0.03     Low  
cufflinks 1.17        
cufflinks 0.031     Low  
cufflinks 2.392       High

0 Strain