Gene : Glyma.15G186400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13683:SF296 - ASPARTYL PROTEASE FAMILY PROTEIN Genomic Order:  1864
Name:  ? Glyma.15G186400 Secondary Identifier:  ? PAC:30497017
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G186400 0.5kb upstream 0.5kb upstream 5290 true Chr15: 19155845-19161134 Glycine max
Glyma.15G186400 0.5kb upstream 0.5kb upstream 500 false Chr15: 19160635-19161134 Glycine max
Glyma.15G186400 0.5kb downstream 0.5kb downstream 5290 true Chr15: 19155345-19160634 Glycine max
Glyma.15G186400 0.5kb downstream 0.5kb downstream 500 false Chr15: 19155345-19155844 Glycine max
Glyma.15G186400 1.0kb upstream 1.0kb upstream 5790 true Chr15: 19155845-19161634 Glycine max
Glyma.15G186400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 19160635-19161634 Glycine max
Glyma.15G186400 1.0kb downstream 1.0kb downstream 5790 true Chr15: 19154845-19160634 Glycine max
Glyma.15G186400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 19154845-19155844 Glycine max
Glyma.15G186400 2.0kb upstream 2.0kb upstream 6790 true Chr15: 19155845-19162634 Glycine max
Glyma.15G186400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 19160635-19162634 Glycine max
Glyma.15G186400 2.0kb downstream 2.0kb downstream 6790 true Chr15: 19153845-19160634 Glycine max
Glyma.15G186400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 19153845-19155844 Glycine max
Glyma.15G186400 5.0kb upstream 5.0kb upstream 9790 true Chr15: 19155845-19165634 Glycine max
Glyma.15G186400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 19160635-19165634 Glycine max
Glyma.15G186400 5.0kb downstream 5.0kb downstream 9790 true Chr15: 19150845-19160634 Glycine max
Glyma.15G186400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 19150845-19155844 Glycine max
Glyma.15G186400 10.0kb upstream 10.0kb upstream 14790 true Chr15: 19155845-19170634 Glycine max
Glyma.15G186400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 19160635-19170634 Glycine max
Glyma.15G186400 10.0kb downstream 10.0kb downstream 14790 true Chr15: 19145845-19160634 Glycine max
Glyma.15G186400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 19145845-19155844 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780043 5273 Angiosperm View MSA
122311661 5265 Fabidae View MSA
124071121 5270 Rosid View MSA
123744877 5271 Pentapetalae View MSA
122771281 5272 Eudicot View MSA
121051677 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.30293 0.0 7.87563   Low
cufflinks 4.65489 0.0 21.4832    
cufflinks 2.44938 0.0 11.8565   Low
cufflinks 10.9703 0.0 42.1119    
cufflinks 7.88731 0.0 31.6596    
cufflinks 5.25571 0.0 22.8995    
cufflinks 10.2203 0.0 40.1911    
cufflinks 10.7292 0.0 41.3827    
cufflinks 5.20524 0.0 22.8207    
cufflinks 2.093       High
cufflinks 0.312       Low
cufflinks 0.437        
cufflinks 0.56        
cufflinks 0.847        
cufflinks 0.322       Low
cufflinks 0.75        
cufflinks 0.45        
cufflinks 0.775        
cufflinks 2.052       High
cufflinks 0.829        
cufflinks 0.326       Low
cufflinks 0.848        
cufflinks 2.215       High
cufflinks 0.484        
cufflinks 0.854        
cufflinks 0.485        

0 Strain