Gene : Glyma.15G187500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32166:SF18 - HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN Genomic Order:  1875
Name:  ? Glyma.15G187500 Secondary Identifier:  ? PAC:30495751
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G187500 0.5kb upstream 0.5kb upstream 6961 true Chr15: 19566130-19573090 Glycine max
Glyma.15G187500 0.5kb upstream 0.5kb upstream 500 false Chr15: 19566130-19566629 Glycine max
Glyma.15G187500 0.5kb downstream 0.5kb downstream 6961 true Chr15: 19566630-19573590 Glycine max
Glyma.15G187500 0.5kb downstream 0.5kb downstream 500 false Chr15: 19573091-19573590 Glycine max
Glyma.15G187500 1.0kb upstream 1.0kb upstream 7461 true Chr15: 19565630-19573090 Glycine max
Glyma.15G187500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 19565630-19566629 Glycine max
Glyma.15G187500 1.0kb downstream 1.0kb downstream 7461 true Chr15: 19566630-19574090 Glycine max
Glyma.15G187500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 19573091-19574090 Glycine max
Glyma.15G187500 2.0kb upstream 2.0kb upstream 8461 true Chr15: 19564630-19573090 Glycine max
Glyma.15G187500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 19564630-19566629 Glycine max
Glyma.15G187500 2.0kb downstream 2.0kb downstream 8461 true Chr15: 19566630-19575090 Glycine max
Glyma.15G187500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 19573091-19575090 Glycine max
Glyma.15G187500 5.0kb upstream 5.0kb upstream 11461 true Chr15: 19561630-19573090 Glycine max
Glyma.15G187500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 19561630-19566629 Glycine max
Glyma.15G187500 5.0kb downstream 5.0kb downstream 11461 true Chr15: 19566630-19578090 Glycine max
Glyma.15G187500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 19573091-19578090 Glycine max
Glyma.15G187500 10.0kb upstream 10.0kb upstream 16461 true Chr15: 19556630-19573090 Glycine max
Glyma.15G187500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 19556630-19566629 Glycine max
Glyma.15G187500 10.0kb downstream 10.0kb downstream 16461 true Chr15: 19566630-19583090 Glycine max
Glyma.15G187500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 19573091-19583090 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309557 5265 Fabidae View MSA
124071231 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.51971 0.0 21.1546    
cufflinks 4.00871 0.0 17.8972    
cufflinks 4.33538 0.0 18.6482   High
cufflinks 3.22408 0.0 14.9085    
cufflinks 3.07257 0.0 14.8666    
cufflinks 3.71921 0.0 16.7398    
cufflinks 2.9194 0.0 16.1879   Low
cufflinks 3.16273 0.0 15.9869    
cufflinks 3.89566 0.0 18.7743    
cufflinks 0.292        
cufflinks 0.304        
cufflinks 0.378        
cufflinks 0.353        
cufflinks 0.356        
cufflinks 0.25       Low
cufflinks 0.459        
cufflinks 0.21       Low
cufflinks 0.407        
cufflinks 0.478       High
cufflinks 0.474       High
cufflinks 0.306        
cufflinks 0.528       High
cufflinks 0.411        
cufflinks 0.337        
cufflinks 0.438        
cufflinks 0.341        

0 Strain