Gene : Glyma.15G188000 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11993 - NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT Genomic Order:  1880
Name:  ? Glyma.15G188000 Secondary Identifier:  ? PAC:30495682
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5083 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G188000 0.5kb upstream 0.5kb upstream 851 true Chr15: 19606020-19606870 Glycine max
Glyma.15G188000 0.5kb upstream 0.5kb upstream 500 false Chr15: 19606020-19606519 Glycine max
Glyma.15G188000 0.5kb downstream 0.5kb downstream 851 true Chr15: 19606520-19607370 Glycine max
Glyma.15G188000 0.5kb downstream 0.5kb downstream 500 false Chr15: 19606871-19607370 Glycine max
Glyma.15G188000 1.0kb upstream 1.0kb upstream 1351 true Chr15: 19605520-19606870 Glycine max
Glyma.15G188000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 19605520-19606519 Glycine max
Glyma.15G188000 1.0kb downstream 1.0kb downstream 1351 true Chr15: 19606520-19607870 Glycine max
Glyma.15G188000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 19606871-19607870 Glycine max
Glyma.15G188000 2.0kb upstream 2.0kb upstream 2351 true Chr15: 19604520-19606870 Glycine max
Glyma.15G188000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 19604520-19606519 Glycine max
Glyma.15G188000 2.0kb downstream 2.0kb downstream 2351 true Chr15: 19606520-19608870 Glycine max
Glyma.15G188000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 19606871-19608870 Glycine max
Glyma.15G188000 5.0kb upstream 5.0kb upstream 5351 true Chr15: 19601520-19606870 Glycine max
Glyma.15G188000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 19601520-19606519 Glycine max
Glyma.15G188000 5.0kb downstream 5.0kb downstream 5351 true Chr15: 19606520-19611870 Glycine max
Glyma.15G188000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 19606871-19611870 Glycine max
Glyma.15G188000 10.0kb upstream 10.0kb upstream 10351 true Chr15: 19596520-19606870 Glycine max
Glyma.15G188000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 19596520-19606519 Glycine max
Glyma.15G188000 10.0kb downstream 10.0kb downstream 10351 true Chr15: 19606520-19616870 Glycine max
Glyma.15G188000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 19606871-19616870 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026692 5273 Angiosperm View MSA
122250313 5265 Fabidae View MSA
124070566 5270 Rosid View MSA
123750538 5271 Pentapetalae View MSA
122773711 5272 Eudicot View MSA
121350081 5274 Embryophyte View MSA
123381572 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.32447 0.0 5.19434    
cufflinks 1.45929 0.0 5.69583    
cufflinks 3.21216 0.0 12.1033    
cufflinks 18.1244 0.0 60.1191   High
cufflinks 2.61192 0.0 9.9219    
cufflinks 3.19032 0.0 12.0476    
cufflinks 2.67197 0.0 10.1481    
cufflinks 2.01281 0.0 7.73183    
cufflinks 2.3156 0.0 8.84633    
cufflinks 0.376       High
cufflinks 0.056        
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.138       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.052     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.075     Low  
cufflinks 0.048     Low  
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.051     Low  
cufflinks 0.041     Low  
cufflinks 0.041     Low  

0 Strain