Gene : Glyma.15G245600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10774:SF80 - CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  2456
Name:  ? Glyma.15G245600 Secondary Identifier:  ? PAC:30498537
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G245600 0.5kb upstream 0.5kb upstream 7062 true Chr15: 46812226-46819287 Glycine max
Glyma.15G245600 0.5kb upstream 0.5kb upstream 500 false Chr15: 46812226-46812725 Glycine max
Glyma.15G245600 0.5kb downstream 0.5kb downstream 7062 true Chr15: 46812726-46819787 Glycine max
Glyma.15G245600 0.5kb downstream 0.5kb downstream 500 false Chr15: 46819288-46819787 Glycine max
Glyma.15G245600 1.0kb upstream 1.0kb upstream 7562 true Chr15: 46811726-46819287 Glycine max
Glyma.15G245600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 46811726-46812725 Glycine max
Glyma.15G245600 1.0kb downstream 1.0kb downstream 7562 true Chr15: 46812726-46820287 Glycine max
Glyma.15G245600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 46819288-46820287 Glycine max
Glyma.15G245600 2.0kb upstream 2.0kb upstream 8562 true Chr15: 46810726-46819287 Glycine max
Glyma.15G245600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 46810726-46812725 Glycine max
Glyma.15G245600 2.0kb downstream 2.0kb downstream 8562 true Chr15: 46812726-46821287 Glycine max
Glyma.15G245600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 46819288-46821287 Glycine max
Glyma.15G245600 5.0kb upstream 5.0kb upstream 11562 true Chr15: 46807726-46819287 Glycine max
Glyma.15G245600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 46807726-46812725 Glycine max
Glyma.15G245600 5.0kb downstream 5.0kb downstream 11562 true Chr15: 46812726-46824287 Glycine max
Glyma.15G245600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 46819288-46824287 Glycine max
Glyma.15G245600 10.0kb upstream 10.0kb upstream 16562 true Chr15: 46802726-46819287 Glycine max
Glyma.15G245600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 46802726-46812725 Glycine max
Glyma.15G245600 10.0kb downstream 10.0kb downstream 16562 true Chr15: 46812726-46829287 Glycine max
Glyma.15G245600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 46819288-46829287 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312544 5265 Fabidae View MSA
124066710 5270 Rosid View MSA
123745986 5271 Pentapetalae View MSA
122787732 5272 Eudicot View MSA
122045584 5273 Angiosperm View MSA
121350253 5274 Embryophyte View MSA
123426647 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.18672 0.0 8.98919   Low
cufflinks 3.33366 0.0 9.35703   Low
cufflinks 3.20674 0.0 8.99849   Low
cufflinks 6.13419 0.0 16.4841    
cufflinks 6.80219 0.0 18.2329    
cufflinks 13.8622 0.0 37.3359   High
cufflinks 7.03561 0.0 18.84    
cufflinks 4.8246 0.0 13.1302    
cufflinks 6.90551 0.0 18.4948    
cufflinks 3.194        
cufflinks 5.574     High  
cufflinks 3.471        
cufflinks 6.611       High
cufflinks 3.843        
cufflinks 3.271        
cufflinks 2.641        
cufflinks 6.761     High High
cufflinks 3.773        
cufflinks 2.587        
cufflinks 1.878       Low
cufflinks 6.13     High  
cufflinks 2.132       Low
cufflinks 1.471       Low
cufflinks 7.708     High High
cufflinks 2.055       Low
cufflinks 9.442     High High

0 Strain