Gene : Glyma.15G248200 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  2482
Name:  ? Glyma.15G248200 Secondary Identifier:  ? PAC:30497028
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G248200 0.5kb upstream 0.5kb upstream 9928 true Chr15: 47333044-47342971 Glycine max
Glyma.15G248200 0.5kb upstream 0.5kb upstream 500 false Chr15: 47333044-47333543 Glycine max
Glyma.15G248200 0.5kb downstream 0.5kb downstream 9928 true Chr15: 47333544-47343471 Glycine max
Glyma.15G248200 0.5kb downstream 0.5kb downstream 500 false Chr15: 47342972-47343471 Glycine max
Glyma.15G248200 1.0kb upstream 1.0kb upstream 10428 true Chr15: 47332544-47342971 Glycine max
Glyma.15G248200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 47332544-47333543 Glycine max
Glyma.15G248200 1.0kb downstream 1.0kb downstream 10428 true Chr15: 47333544-47343971 Glycine max
Glyma.15G248200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 47342972-47343971 Glycine max
Glyma.15G248200 2.0kb upstream 2.0kb upstream 11428 true Chr15: 47331544-47342971 Glycine max
Glyma.15G248200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 47331544-47333543 Glycine max
Glyma.15G248200 2.0kb downstream 2.0kb downstream 11428 true Chr15: 47333544-47344971 Glycine max
Glyma.15G248200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 47342972-47344971 Glycine max
Glyma.15G248200 5.0kb upstream 5.0kb upstream 14428 true Chr15: 47328544-47342971 Glycine max
Glyma.15G248200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 47328544-47333543 Glycine max
Glyma.15G248200 5.0kb downstream 5.0kb downstream 14428 true Chr15: 47333544-47347971 Glycine max
Glyma.15G248200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 47342972-47347971 Glycine max
Glyma.15G248200 10.0kb upstream 10.0kb upstream 19428 true Chr15: 47323544-47342971 Glycine max
Glyma.15G248200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 47323544-47333543 Glycine max
Glyma.15G248200 10.0kb downstream 10.0kb downstream 19428 true Chr15: 47333544-47352971 Glycine max
Glyma.15G248200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 47342972-47352971 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299615 5265 Fabidae View MSA
124069029 5270 Rosid View MSA
123741406 5271 Pentapetalae View MSA
122770044 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9916 0.0 99.9884    
cufflinks 16.5334 0.0 76.4687    
cufflinks 36.5845 0.0 225.309 High High
cufflinks 8.62963 0.0 40.6007    
cufflinks 12.5916 0.0 59.584    
cufflinks 5.05316 0.0 23.1014   Low
cufflinks 16.3885 0.0 84.7068    
cufflinks 6.97616 0.0 30.4946    
cufflinks 9.54175 0.0 44.4574    
cufflinks 0.291       Low
cufflinks 1.207        
cufflinks 1.023        
cufflinks 0.852        
cufflinks 0.813        
cufflinks 1.349        
cufflinks 0.667        
cufflinks 0.155       Low
cufflinks 0.555        
cufflinks 1.035        
cufflinks 0.788        
cufflinks 1.285        
cufflinks 0.882        
cufflinks 0.572        
cufflinks 1.885       High
cufflinks 0.759        
cufflinks 0.556        

0 Strain