Gene : Glyma.15G236200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR26402//PTHR26402:SF574 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM Genomic Order:  2362
Name:  ? Glyma.15G236200 Secondary Identifier:  ? PAC:30498334
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G236200 0.5kb upstream 0.5kb upstream 2622 true Chr15: 44485873-44488494 Glycine max
Glyma.15G236200 0.5kb upstream 0.5kb upstream 500 false Chr15: 44485873-44486372 Glycine max
Glyma.15G236200 0.5kb downstream 0.5kb downstream 2622 true Chr15: 44486373-44488994 Glycine max
Glyma.15G236200 0.5kb downstream 0.5kb downstream 500 false Chr15: 44488495-44488994 Glycine max
Glyma.15G236200 1.0kb upstream 1.0kb upstream 3122 true Chr15: 44485373-44488494 Glycine max
Glyma.15G236200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 44485373-44486372 Glycine max
Glyma.15G236200 1.0kb downstream 1.0kb downstream 3122 true Chr15: 44486373-44489494 Glycine max
Glyma.15G236200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 44488495-44489494 Glycine max
Glyma.15G236200 2.0kb upstream 2.0kb upstream 4122 true Chr15: 44484373-44488494 Glycine max
Glyma.15G236200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 44484373-44486372 Glycine max
Glyma.15G236200 2.0kb downstream 2.0kb downstream 4122 true Chr15: 44486373-44490494 Glycine max
Glyma.15G236200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 44488495-44490494 Glycine max
Glyma.15G236200 5.0kb upstream 5.0kb upstream 7122 true Chr15: 44481373-44488494 Glycine max
Glyma.15G236200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 44481373-44486372 Glycine max
Glyma.15G236200 5.0kb downstream 5.0kb downstream 7122 true Chr15: 44486373-44493494 Glycine max
Glyma.15G236200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 44488495-44493494 Glycine max
Glyma.15G236200 10.0kb upstream 10.0kb upstream 12122 true Chr15: 44476373-44488494 Glycine max
Glyma.15G236200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 44476373-44486372 Glycine max
Glyma.15G236200 10.0kb downstream 10.0kb downstream 12122 true Chr15: 44486373-44498494 Glycine max
Glyma.15G236200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 44488495-44498494 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303928 5265 Fabidae View MSA
124073776 5270 Rosid View MSA
123749926 5271 Pentapetalae View MSA
122796134 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.23043 0.0 0.905147    
cufflinks 0.0382471 0.0 0.16567 Low Low
cufflinks 11.3987 0.0 32.5201    
cufflinks 22.1055 0.0 59.6441   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0921549 0.0 0.375572 Low  
cufflinks 4.15249 0.0 13.5238    
cufflinks 0.239        
cufflinks 0.146        
cufflinks 0.069     Low  
cufflinks 9.004     High High
cufflinks 9.304     High High
cufflinks 0.785        
cufflinks 0.008     Low Low
cufflinks 0.088        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.13        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.07        
cufflinks 0.007     Low Low
cufflinks 0.627        

0 Strain