Gene : Glyma.15G238800 G. max Wm82.a2.v1
Defline:  (1 of 1) PF01701//PF02529 - Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ) // Cytochrome B6-F complex subunit 5 (PetG) Genomic Order:  2388
Name:  ? Glyma.15G238800 Secondary Identifier:  ? PAC:30495815
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G238800 0.5kb upstream 0.5kb upstream 1441 true Chr15: 44966639-44968079 Glycine max
Glyma.15G238800 0.5kb upstream 0.5kb upstream 500 false Chr15: 44966639-44967138 Glycine max
Glyma.15G238800 0.5kb downstream 0.5kb downstream 1441 true Chr15: 44967139-44968579 Glycine max
Glyma.15G238800 0.5kb downstream 0.5kb downstream 500 false Chr15: 44968080-44968579 Glycine max
Glyma.15G238800 1.0kb upstream 1.0kb upstream 1941 true Chr15: 44966139-44968079 Glycine max
Glyma.15G238800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 44966139-44967138 Glycine max
Glyma.15G238800 1.0kb downstream 1.0kb downstream 1941 true Chr15: 44967139-44969079 Glycine max
Glyma.15G238800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 44968080-44969079 Glycine max
Glyma.15G238800 2.0kb upstream 2.0kb upstream 2941 true Chr15: 44965139-44968079 Glycine max
Glyma.15G238800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 44965139-44967138 Glycine max
Glyma.15G238800 2.0kb downstream 2.0kb downstream 2941 true Chr15: 44967139-44970079 Glycine max
Glyma.15G238800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 44968080-44970079 Glycine max
Glyma.15G238800 5.0kb upstream 5.0kb upstream 5941 true Chr15: 44962139-44968079 Glycine max
Glyma.15G238800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 44962139-44967138 Glycine max
Glyma.15G238800 5.0kb downstream 5.0kb downstream 5941 true Chr15: 44967139-44973079 Glycine max
Glyma.15G238800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 44968080-44973079 Glycine max
Glyma.15G238800 10.0kb upstream 10.0kb upstream 10941 true Chr15: 44957139-44968079 Glycine max
Glyma.15G238800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 44957139-44967138 Glycine max
Glyma.15G238800 10.0kb downstream 10.0kb downstream 10941 true Chr15: 44967139-44978079 Glycine max
Glyma.15G238800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 44968080-44978079 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029213 5273 Angiosperm View MSA
122249736 5265 Fabidae Singleton cluster - no MSA
123993121 5270 Rosid Singleton cluster - no MSA
123567929 5271 Pentapetalae Singleton cluster - no MSA
122796023 5272 Eudicot View MSA
121298583 5274 Embryophyte View MSA
123336547 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.394526 0.0 1.76876    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.33268E-4 0.0 0.0182298 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain