Gene : Glyma.15G239000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15238:SF3 - 50S RIBOSOMAL PROTEIN L33, CHLOROPLASTIC Genomic Order:  2390
Name:  ? Glyma.15G239000 Secondary Identifier:  ? PAC:30497747
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G239000 0.5kb upstream 0.5kb upstream 701 true Chr15: 44972671-44973371 Glycine max
Glyma.15G239000 0.5kb upstream 0.5kb upstream 500 false Chr15: 44972671-44973170 Glycine max
Glyma.15G239000 0.5kb downstream 0.5kb downstream 701 true Chr15: 44973171-44973871 Glycine max
Glyma.15G239000 0.5kb downstream 0.5kb downstream 500 false Chr15: 44973372-44973871 Glycine max
Glyma.15G239000 1.0kb upstream 1.0kb upstream 1201 true Chr15: 44972171-44973371 Glycine max
Glyma.15G239000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 44972171-44973170 Glycine max
Glyma.15G239000 1.0kb downstream 1.0kb downstream 1201 true Chr15: 44973171-44974371 Glycine max
Glyma.15G239000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 44973372-44974371 Glycine max
Glyma.15G239000 2.0kb upstream 2.0kb upstream 2201 true Chr15: 44971171-44973371 Glycine max
Glyma.15G239000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 44971171-44973170 Glycine max
Glyma.15G239000 2.0kb downstream 2.0kb downstream 2201 true Chr15: 44973171-44975371 Glycine max
Glyma.15G239000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 44973372-44975371 Glycine max
Glyma.15G239000 5.0kb upstream 5.0kb upstream 5201 true Chr15: 44968171-44973371 Glycine max
Glyma.15G239000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 44968171-44973170 Glycine max
Glyma.15G239000 5.0kb downstream 5.0kb downstream 5201 true Chr15: 44973171-44978371 Glycine max
Glyma.15G239000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 44973372-44978371 Glycine max
Glyma.15G239000 10.0kb upstream 10.0kb upstream 10201 true Chr15: 44963171-44973371 Glycine max
Glyma.15G239000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 44963171-44973170 Glycine max
Glyma.15G239000 10.0kb downstream 10.0kb downstream 10201 true Chr15: 44973171-44983371 Glycine max
Glyma.15G239000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 44973372-44983371 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029878 5273 Angiosperm View MSA
122250319 5265 Fabidae View MSA
124039179 5270 Rosid View MSA
123753009 5271 Pentapetalae View MSA
122793366 5272 Eudicot View MSA
121299138 5274 Embryophyte View MSA
123428185 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain