Gene : Glyma.15G227500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11413:SF55 - CYSTEINE PROTEINASE INHIBITOR 6 Genomic Order:  2275
Name:  ? Glyma.15G227500 Secondary Identifier:  ? PAC:30498418
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G227500 0.5kb upstream 0.5kb upstream 5070 true Chr15: 42044082-42049151 Glycine max
Glyma.15G227500 0.5kb upstream 0.5kb upstream 500 false Chr15: 42044082-42044581 Glycine max
Glyma.15G227500 0.5kb downstream 0.5kb downstream 5070 true Chr15: 42044582-42049651 Glycine max
Glyma.15G227500 0.5kb downstream 0.5kb downstream 500 false Chr15: 42049152-42049651 Glycine max
Glyma.15G227500 1.0kb upstream 1.0kb upstream 5570 true Chr15: 42043582-42049151 Glycine max
Glyma.15G227500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 42043582-42044581 Glycine max
Glyma.15G227500 1.0kb downstream 1.0kb downstream 5570 true Chr15: 42044582-42050151 Glycine max
Glyma.15G227500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 42049152-42050151 Glycine max
Glyma.15G227500 2.0kb upstream 2.0kb upstream 6570 true Chr15: 42042582-42049151 Glycine max
Glyma.15G227500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 42042582-42044581 Glycine max
Glyma.15G227500 2.0kb downstream 2.0kb downstream 6570 true Chr15: 42044582-42051151 Glycine max
Glyma.15G227500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 42049152-42051151 Glycine max
Glyma.15G227500 5.0kb upstream 5.0kb upstream 9570 true Chr15: 42039582-42049151 Glycine max
Glyma.15G227500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 42039582-42044581 Glycine max
Glyma.15G227500 5.0kb downstream 5.0kb downstream 9570 true Chr15: 42044582-42054151 Glycine max
Glyma.15G227500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 42049152-42054151 Glycine max
Glyma.15G227500 10.0kb upstream 10.0kb upstream 14570 true Chr15: 42034582-42049151 Glycine max
Glyma.15G227500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 42034582-42044581 Glycine max
Glyma.15G227500 10.0kb downstream 10.0kb downstream 14570 true Chr15: 42044582-42059151 Glycine max
Glyma.15G227500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 42049152-42059151 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308469 5265 Fabidae View MSA
124074008 5270 Rosid View MSA
123740864 5271 Pentapetalae View MSA
122789920 5272 Eudicot View MSA
122041687 5273 Angiosperm View MSA
121347429 5274 Embryophyte View MSA
123424301 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.6992 0.0 58.0811   Low
cufflinks 23.8888 0.0 63.8128 High  
cufflinks 45.4806 0.0 122.964 High High
cufflinks 35.2421 0.0 94.3131 High  
cufflinks 24.9173 0.0 66.5127 High  
cufflinks 32.294 0.0 86.2476 High  
cufflinks 48.0118 0.0 130.219 High High
cufflinks 29.0171 0.0 77.428 High  
cufflinks 19.7984 0.0 53.1142 High Low
cufflinks 20.5     High High
cufflinks 21.96     High High
cufflinks 14.853     High  
cufflinks 4.163       Low
cufflinks 2.229       Low
cufflinks 16.074     High  
cufflinks 6.189        
cufflinks 30.598     High High
cufflinks 12.145     High  
cufflinks 5.453        
cufflinks 4.864        
cufflinks 10.287     High  
cufflinks 4.68        
cufflinks 9.152     High  
cufflinks 16.375     High  
cufflinks 4.905        
cufflinks 19.533     High  

0 Strain