Gene : Glyma.15G229300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31696:SF4 - EXPRESSED PROTEIN Genomic Order:  2293
Name:  ? Glyma.15G229300 Secondary Identifier:  ? PAC:30499902
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G229300 0.5kb upstream 0.5kb upstream 1280 true Chr15: 42991865-42993144 Glycine max
Glyma.15G229300 0.5kb upstream 0.5kb upstream 500 false Chr15: 42992645-42993144 Glycine max
Glyma.15G229300 0.5kb downstream 0.5kb downstream 1280 true Chr15: 42991365-42992644 Glycine max
Glyma.15G229300 0.5kb downstream 0.5kb downstream 500 false Chr15: 42991365-42991864 Glycine max
Glyma.15G229300 1.0kb upstream 1.0kb upstream 1780 true Chr15: 42991865-42993644 Glycine max
Glyma.15G229300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 42992645-42993644 Glycine max
Glyma.15G229300 1.0kb downstream 1.0kb downstream 1780 true Chr15: 42990865-42992644 Glycine max
Glyma.15G229300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 42990865-42991864 Glycine max
Glyma.15G229300 2.0kb upstream 2.0kb upstream 2780 true Chr15: 42991865-42994644 Glycine max
Glyma.15G229300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 42992645-42994644 Glycine max
Glyma.15G229300 2.0kb downstream 2.0kb downstream 2780 true Chr15: 42989865-42992644 Glycine max
Glyma.15G229300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 42989865-42991864 Glycine max
Glyma.15G229300 5.0kb upstream 5.0kb upstream 5780 true Chr15: 42991865-42997644 Glycine max
Glyma.15G229300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 42992645-42997644 Glycine max
Glyma.15G229300 5.0kb downstream 5.0kb downstream 5780 true Chr15: 42986865-42992644 Glycine max
Glyma.15G229300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 42986865-42991864 Glycine max
Glyma.15G229300 10.0kb upstream 10.0kb upstream 10780 true Chr15: 42991865-43002644 Glycine max
Glyma.15G229300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 42992645-43002644 Glycine max
Glyma.15G229300 10.0kb downstream 10.0kb downstream 10780 true Chr15: 42981865-42992644 Glycine max
Glyma.15G229300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 42981865-42991864 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306691 5265 Fabidae View MSA
124073904 5270 Rosid View MSA
123746420 5271 Pentapetalae View MSA
122793418 5272 Eudicot View MSA
122044454 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.383394 0.0 1.49355    
cufflinks 0.0796493 0.0 0.33342 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.31595 0.0 1.23723    
cufflinks 29.2299 0.0 78.6444 High High
cufflinks 0.0253986 0.0 0.116331 Low Low
cufflinks 0.0870173 0.0 0.360359 Low  
cufflinks 0.505921 0.0 1.94598    
cufflinks 0.289        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.121       Low
cufflinks 2.123       High
cufflinks 0.172       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.558        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.721       High
cufflinks 0.317        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.356        
cufflinks 0.669        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.449        
cufflinks 0.243        

0 Strain