Gene : Glyma.15G229500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Genomic Order:  2295
Name:  ? Glyma.15G229500 Secondary Identifier:  ? PAC:30499146
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G229500 0.5kb upstream 0.5kb upstream 4921 true Chr15: 43045904-43050824 Glycine max
Glyma.15G229500 0.5kb upstream 0.5kb upstream 500 false Chr15: 43050325-43050824 Glycine max
Glyma.15G229500 0.5kb downstream 0.5kb downstream 4921 true Chr15: 43045404-43050324 Glycine max
Glyma.15G229500 0.5kb downstream 0.5kb downstream 500 false Chr15: 43045404-43045903 Glycine max
Glyma.15G229500 1.0kb upstream 1.0kb upstream 5421 true Chr15: 43045904-43051324 Glycine max
Glyma.15G229500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 43050325-43051324 Glycine max
Glyma.15G229500 1.0kb downstream 1.0kb downstream 5421 true Chr15: 43044904-43050324 Glycine max
Glyma.15G229500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 43044904-43045903 Glycine max
Glyma.15G229500 2.0kb upstream 2.0kb upstream 6421 true Chr15: 43045904-43052324 Glycine max
Glyma.15G229500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 43050325-43052324 Glycine max
Glyma.15G229500 2.0kb downstream 2.0kb downstream 6421 true Chr15: 43043904-43050324 Glycine max
Glyma.15G229500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 43043904-43045903 Glycine max
Glyma.15G229500 5.0kb upstream 5.0kb upstream 9421 true Chr15: 43045904-43055324 Glycine max
Glyma.15G229500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 43050325-43055324 Glycine max
Glyma.15G229500 5.0kb downstream 5.0kb downstream 9421 true Chr15: 43040904-43050324 Glycine max
Glyma.15G229500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 43040904-43045903 Glycine max
Glyma.15G229500 10.0kb upstream 10.0kb upstream 14421 true Chr15: 43045904-43060324 Glycine max
Glyma.15G229500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 43050325-43060324 Glycine max
Glyma.15G229500 10.0kb downstream 10.0kb downstream 14421 true Chr15: 43035904-43050324 Glycine max
Glyma.15G229500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 43035904-43045903 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298382 5265 Fabidae View MSA
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.183023 0.0 1.59013 Low  
cufflinks 0.175475 0.0 1.54759 Low  
cufflinks 0.092696 0.0 1.17478 Low Low
cufflinks 0.206601 0.0 1.58729    
cufflinks 0.0756662 0.0 0.943108 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.36034 0.0 2.29267    
cufflinks 1.41153 0.0 5.35022   High
cufflinks 0.573087 0.0 3.03501    
cufflinks 0.253        
cufflinks 0.428        
cufflinks 0.306        
cufflinks 0.008     Low Low
cufflinks 0.003     Low Low
cufflinks 0.884        
cufflinks 0.551        
cufflinks 0.065     Low  
cufflinks 0.413        
cufflinks 0.235        
cufflinks 1.054        
cufflinks 0.472        
cufflinks 1.027        
cufflinks 0.492        
cufflinks 0.59        
cufflinks 0.954        
cufflinks 0.153        

0 Strain