Gene : Glyma.15G216400 G. max Wm82.a2.v1
Defline:  (1 of 2) PF08170 - POPLD (NUC188) domain (POPLD) Genomic Order:  2164
Name:  ? Glyma.15G216400 Secondary Identifier:  ? PAC:30498098
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G216400 0.5kb upstream 0.5kb upstream 7358 true Chr15: 35590481-35597838 Glycine max
Glyma.15G216400 0.5kb upstream 0.5kb upstream 500 false Chr15: 35597339-35597838 Glycine max
Glyma.15G216400 0.5kb downstream 0.5kb downstream 7358 true Chr15: 35589981-35597338 Glycine max
Glyma.15G216400 0.5kb downstream 0.5kb downstream 500 false Chr15: 35589981-35590480 Glycine max
Glyma.15G216400 1.0kb upstream 1.0kb upstream 7858 true Chr15: 35590481-35598338 Glycine max
Glyma.15G216400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 35597339-35598338 Glycine max
Glyma.15G216400 1.0kb downstream 1.0kb downstream 7858 true Chr15: 35589481-35597338 Glycine max
Glyma.15G216400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 35589481-35590480 Glycine max
Glyma.15G216400 2.0kb upstream 2.0kb upstream 8858 true Chr15: 35590481-35599338 Glycine max
Glyma.15G216400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 35597339-35599338 Glycine max
Glyma.15G216400 2.0kb downstream 2.0kb downstream 8858 true Chr15: 35588481-35597338 Glycine max
Glyma.15G216400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 35588481-35590480 Glycine max
Glyma.15G216400 5.0kb upstream 5.0kb upstream 11858 true Chr15: 35590481-35602338 Glycine max
Glyma.15G216400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 35597339-35602338 Glycine max
Glyma.15G216400 5.0kb downstream 5.0kb downstream 11858 true Chr15: 35585481-35597338 Glycine max
Glyma.15G216400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 35585481-35590480 Glycine max
Glyma.15G216400 10.0kb upstream 10.0kb upstream 16858 true Chr15: 35590481-35607338 Glycine max
Glyma.15G216400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 35597339-35607338 Glycine max
Glyma.15G216400 10.0kb downstream 10.0kb downstream 16858 true Chr15: 35580481-35597338 Glycine max
Glyma.15G216400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 35580481-35590480 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306842 5265 Fabidae View MSA
124069043 5270 Rosid View MSA
123740303 5271 Pentapetalae View MSA
122791555 5272 Eudicot View MSA
122047231 5273 Angiosperm View MSA
121344727 5274 Embryophyte View MSA
123380091 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.89866 0.0 18.4915   High
cufflinks 5.48509 0.0 14.8393    
cufflinks 6.22809 0.0 16.7242    
cufflinks 4.19057 0.0 11.5299    
cufflinks 2.81753 0.0 8.09209   Low
cufflinks 2.45242 0.0 7.14845   Low
cufflinks 6.09067 0.0 16.4121    
cufflinks 4.15668 0.0 11.4463    
cufflinks 3.70904 0.0 10.3242    
cufflinks 1.862       Low
cufflinks 2.543        
cufflinks 4.104        
cufflinks 1.665       Low
cufflinks 1.895       Low
cufflinks 3.777        
cufflinks 4.444        
cufflinks 1.541       Low
cufflinks 4.404        
cufflinks 4.184        
cufflinks 6.334       High
cufflinks 2.67        
cufflinks 5.847       High
cufflinks 5.396       High
cufflinks 2.596        
cufflinks 5.077        
cufflinks 1.758       Low

0 Strain