Gene : Glyma.15G216700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11527//PTHR11527:SF144 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY Genomic Order:  2167
Name:  ? Glyma.15G216700 Secondary Identifier:  ? PAC:30498754
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G216700 0.5kb upstream 0.5kb upstream 3738 true Chr15: 35649229-35652966 Glycine max
Glyma.15G216700 0.5kb upstream 0.5kb upstream 500 false Chr15: 35652467-35652966 Glycine max
Glyma.15G216700 0.5kb downstream 0.5kb downstream 3738 true Chr15: 35648729-35652466 Glycine max
Glyma.15G216700 0.5kb downstream 0.5kb downstream 500 false Chr15: 35648729-35649228 Glycine max
Glyma.15G216700 1.0kb upstream 1.0kb upstream 4238 true Chr15: 35649229-35653466 Glycine max
Glyma.15G216700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 35652467-35653466 Glycine max
Glyma.15G216700 1.0kb downstream 1.0kb downstream 4238 true Chr15: 35648229-35652466 Glycine max
Glyma.15G216700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 35648229-35649228 Glycine max
Glyma.15G216700 2.0kb upstream 2.0kb upstream 5238 true Chr15: 35649229-35654466 Glycine max
Glyma.15G216700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 35652467-35654466 Glycine max
Glyma.15G216700 2.0kb downstream 2.0kb downstream 5238 true Chr15: 35647229-35652466 Glycine max
Glyma.15G216700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 35647229-35649228 Glycine max
Glyma.15G216700 5.0kb upstream 5.0kb upstream 8238 true Chr15: 35649229-35657466 Glycine max
Glyma.15G216700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 35652467-35657466 Glycine max
Glyma.15G216700 5.0kb downstream 5.0kb downstream 8238 true Chr15: 35644229-35652466 Glycine max
Glyma.15G216700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 35644229-35649228 Glycine max
Glyma.15G216700 10.0kb upstream 10.0kb upstream 13238 true Chr15: 35649229-35662466 Glycine max
Glyma.15G216700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 35652467-35662466 Glycine max
Glyma.15G216700 10.0kb downstream 10.0kb downstream 13238 true Chr15: 35639229-35652466 Glycine max
Glyma.15G216700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 35639229-35649228 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312292 5265 Fabidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.394093 0.0 1.45399    
cufflinks 0.739007 0.0 2.61774    
cufflinks 0.277226 0.0 1.0392    
cufflinks 1.01523 0.0 3.48372    
cufflinks 0.942837 0.0 3.27466    
cufflinks 0.38935 0.0 1.43836    
cufflinks 0.0162323 0.0 0.0699112 Low Low
cufflinks 2.52329 0.0 7.67566   High
cufflinks 1.35588 0.0 4.52252    
cufflinks 3.812       High
cufflinks 1.534        
cufflinks 0.451        
cufflinks 3.579       High
cufflinks 0.54        
cufflinks 0.017     Low Low
cufflinks 0.881        
cufflinks 0.795        
cufflinks 1.236        
cufflinks 0.131       Low
cufflinks 0.995        
cufflinks 2.553        
cufflinks 1.125        
cufflinks 0.455        
cufflinks 0.678        
cufflinks 1.068        
cufflinks 1.854        

0 Strain