Gene : Glyma.15G272900 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG3702 - Nuclear polyadenylated RNA binding protein Genomic Order:  2729
Name:  ? Glyma.15G272900 Secondary Identifier:  ? PAC:30497882
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G272900 0.5kb upstream 0.5kb upstream 7403 true Chr15: 51030895-51038297 Glycine max
Glyma.15G272900 0.5kb upstream 0.5kb upstream 500 false Chr15: 51037798-51038297 Glycine max
Glyma.15G272900 0.5kb downstream 0.5kb downstream 7403 true Chr15: 51030395-51037797 Glycine max
Glyma.15G272900 0.5kb downstream 0.5kb downstream 500 false Chr15: 51030395-51030894 Glycine max
Glyma.15G272900 1.0kb upstream 1.0kb upstream 7903 true Chr15: 51030895-51038797 Glycine max
Glyma.15G272900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 51037798-51038797 Glycine max
Glyma.15G272900 1.0kb downstream 1.0kb downstream 7903 true Chr15: 51029895-51037797 Glycine max
Glyma.15G272900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 51029895-51030894 Glycine max
Glyma.15G272900 2.0kb upstream 2.0kb upstream 8903 true Chr15: 51030895-51039797 Glycine max
Glyma.15G272900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 51037798-51039797 Glycine max
Glyma.15G272900 2.0kb downstream 2.0kb downstream 8903 true Chr15: 51028895-51037797 Glycine max
Glyma.15G272900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 51028895-51030894 Glycine max
Glyma.15G272900 5.0kb upstream 5.0kb upstream 11903 true Chr15: 51030895-51042797 Glycine max
Glyma.15G272900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 51037798-51042797 Glycine max
Glyma.15G272900 5.0kb downstream 5.0kb downstream 11903 true Chr15: 51025895-51037797 Glycine max
Glyma.15G272900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 51025895-51030894 Glycine max
Glyma.15G272900 10.0kb upstream 10.0kb upstream 16903 true Chr15: 51030895-51047797 Glycine max
Glyma.15G272900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 51037798-51047797 Glycine max
Glyma.15G272900 10.0kb downstream 10.0kb downstream 16903 true Chr15: 51020895-51037797 Glycine max
Glyma.15G272900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 51020895-51030894 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302784 5265 Fabidae View MSA
124060657 5270 Rosid View MSA
123744402 5271 Pentapetalae View MSA
122787071 5272 Eudicot View MSA
122046161 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121345767 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.09474 0.0 24.4761    
cufflinks 7.07069 0.0 19.3002    
cufflinks 11.5549 0.0 30.8585   High
cufflinks 8.62569 0.0 23.2577    
cufflinks 7.09807 0.0 19.358    
cufflinks 6.71798 0.0 18.3925   Low
cufflinks 11.1854 0.0 29.9145   High
cufflinks 7.89984 0.0 21.4062    
cufflinks 8.94492 0.0 24.0989    
cufflinks 2.818       Low
cufflinks 7.924     High High
cufflinks 4.278        
cufflinks 2.613       Low
cufflinks 2.896       Low
cufflinks 7.482     High High
cufflinks 4.844        
cufflinks 5.598        
cufflinks 3.584        
cufflinks 3.672        
cufflinks 5.788        
cufflinks 6.307     High  
cufflinks 5.399        
cufflinks 3.262       Low
cufflinks 7.721     High High
cufflinks 5.511        
cufflinks 6.955     High High

0 Strain