Gene : Glyma.15G275500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11937:SF257 - ACTIN-RELATED PROTEIN 7 Genomic Order:  2755
Name:  ? Glyma.15G275500 Secondary Identifier:  ? PAC:30497138
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G275500 0.5kb upstream 0.5kb upstream 14499 true Chr15: 51432802-51447300 Glycine max
Glyma.15G275500 0.5kb upstream 0.5kb upstream 500 false Chr15: 51446801-51447300 Glycine max
Glyma.15G275500 0.5kb downstream 0.5kb downstream 14499 true Chr15: 51432302-51446800 Glycine max
Glyma.15G275500 0.5kb downstream 0.5kb downstream 500 false Chr15: 51432302-51432801 Glycine max
Glyma.15G275500 1.0kb upstream 1.0kb upstream 14999 true Chr15: 51432802-51447800 Glycine max
Glyma.15G275500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 51446801-51447800 Glycine max
Glyma.15G275500 1.0kb downstream 1.0kb downstream 14999 true Chr15: 51431802-51446800 Glycine max
Glyma.15G275500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 51431802-51432801 Glycine max
Glyma.15G275500 2.0kb upstream 2.0kb upstream 15999 true Chr15: 51432802-51448800 Glycine max
Glyma.15G275500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 51446801-51448800 Glycine max
Glyma.15G275500 2.0kb downstream 2.0kb downstream 15999 true Chr15: 51430802-51446800 Glycine max
Glyma.15G275500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 51430802-51432801 Glycine max
Glyma.15G275500 5.0kb upstream 5.0kb upstream 18999 true Chr15: 51432802-51451800 Glycine max
Glyma.15G275500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 51446801-51451800 Glycine max
Glyma.15G275500 5.0kb downstream 5.0kb downstream 18999 true Chr15: 51427802-51446800 Glycine max
Glyma.15G275500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 51427802-51432801 Glycine max
Glyma.15G275500 10.0kb upstream 10.0kb upstream 23999 true Chr15: 51432802-51456800 Glycine max
Glyma.15G275500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 51446801-51456800 Glycine max
Glyma.15G275500 10.0kb downstream 10.0kb downstream 23999 true Chr15: 51422802-51446800 Glycine max
Glyma.15G275500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 51422802-51432801 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314401 5265 Fabidae View MSA
124067353 5270 Rosid View MSA
123740879 5271 Pentapetalae View MSA
122792002 5272 Eudicot View MSA
122047685 5273 Angiosperm View MSA
121343857 5274 Embryophyte View MSA
123428641 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.589405 0.0 2.17459   Low
cufflinks 4.77854 0.0 14.1638   High
cufflinks 1.98475 0.0 6.62821    
cufflinks 1.86071 0.0 6.28096    
cufflinks 3.06352 0.0 9.67747    
cufflinks 2.08023 0.0 6.91974    
cufflinks 3.61953 0.0 11.1863    
cufflinks 1.75106 0.0 5.95014    
cufflinks 2.80107 0.0 8.94756    
cufflinks 0.186        
cufflinks 0.083       Low
cufflinks 0.253        
cufflinks 0.528       High
cufflinks 0.659       High
cufflinks 0.085       Low
cufflinks 0.389        
cufflinks 0.201        
cufflinks 0.245        
cufflinks 0.892       High
cufflinks 0.199        
cufflinks 0.132        
cufflinks 0.274        
cufflinks 0.571       High
cufflinks 0.178        
cufflinks 0.258        
cufflinks 0.162        

0 Strain