Gene : Glyma.15G276300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10108//PTHR10108:SF908 - METHYLTRANSFERASE Genomic Order:  2763
Name:  ? Glyma.15G276300 Secondary Identifier:  ? PAC:30498793
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2541 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G276300 0.5kb upstream 0.5kb upstream 6265 true Chr15: 51540578-51546842 Glycine max
Glyma.15G276300 0.5kb upstream 0.5kb upstream 500 false Chr15: 51540578-51541077 Glycine max
Glyma.15G276300 0.5kb downstream 0.5kb downstream 6265 true Chr15: 51541078-51547342 Glycine max
Glyma.15G276300 0.5kb downstream 0.5kb downstream 500 false Chr15: 51546843-51547342 Glycine max
Glyma.15G276300 1.0kb upstream 1.0kb upstream 6765 true Chr15: 51540078-51546842 Glycine max
Glyma.15G276300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 51540078-51541077 Glycine max
Glyma.15G276300 1.0kb downstream 1.0kb downstream 6765 true Chr15: 51541078-51547842 Glycine max
Glyma.15G276300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 51546843-51547842 Glycine max
Glyma.15G276300 2.0kb upstream 2.0kb upstream 7765 true Chr15: 51539078-51546842 Glycine max
Glyma.15G276300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 51539078-51541077 Glycine max
Glyma.15G276300 2.0kb downstream 2.0kb downstream 7765 true Chr15: 51541078-51548842 Glycine max
Glyma.15G276300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 51546843-51548842 Glycine max
Glyma.15G276300 5.0kb upstream 5.0kb upstream 10765 true Chr15: 51536078-51546842 Glycine max
Glyma.15G276300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 51536078-51541077 Glycine max
Glyma.15G276300 5.0kb downstream 5.0kb downstream 10765 true Chr15: 51541078-51551842 Glycine max
Glyma.15G276300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 51546843-51551842 Glycine max
Glyma.15G276300 10.0kb upstream 10.0kb upstream 15765 true Chr15: 51531078-51546842 Glycine max
Glyma.15G276300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 51531078-51541077 Glycine max
Glyma.15G276300 10.0kb downstream 10.0kb downstream 15765 true Chr15: 51541078-51556842 Glycine max
Glyma.15G276300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 51546843-51556842 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
122305838 5265 Fabidae View MSA
124073694 5270 Rosid View MSA
123743908 5271 Pentapetalae View MSA
122793455 5272 Eudicot View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4977 0.0 53.057    
cufflinks 5.23453 0.0 18.9212   Low
cufflinks 4.27069 0.0 16.179   Low
cufflinks 16.3454 0.0 56.0086    
cufflinks 59.7727 0.0 236.537 High High
cufflinks 28.8226 0.0 99.8798 High  
cufflinks 14.6513 0.0 50.398    
cufflinks 10.8463 0.0 38.8121    
cufflinks 35.1329 0.0 124.679 High  
cufflinks 5.7       High
cufflinks 0.977       Low
cufflinks 1.278        
cufflinks 10.465     High High
cufflinks 16.56     High High
cufflinks 1.071        
cufflinks 1.907        
cufflinks 2.31        
cufflinks 4.821        
cufflinks 0.963       Low
cufflinks 1.879        
cufflinks 1.518        
cufflinks 1.714        
cufflinks 1.676        
cufflinks 1.068        
cufflinks 2.24        
cufflinks 2.212        

0 Strain