Gene : Glyma.16G000100 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR22731//PTHR22731:SF9 - RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 Genomic Order:  1
Name:  ? Glyma.16G000100 Secondary Identifier:  ? PAC:30560640
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G000100 0.5kb upstream 0.5kb upstream 4073 true Chr16: 552-4624 Glycine max
Glyma.16G000100 0.5kb upstream 0.5kb upstream 500 false Chr16: 4125-4624 Glycine max
Glyma.16G000100 0.5kb downstream 0.5kb downstream 4073 true Chr16: 52-4124 Glycine max
Glyma.16G000100 0.5kb downstream 0.5kb downstream 500 false Chr16: 52-551 Glycine max
Glyma.16G000100 1.0kb upstream 1.0kb upstream 4573 true Chr16: 552-5124 Glycine max
Glyma.16G000100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4125-5124 Glycine max
Glyma.16G000100 1.0kb downstream 1.0kb downstream 4124 true Chr16: 1-4124 Glycine max
Glyma.16G000100 1.0kb downstream 1.0kb downstream 551 false Chr16: 1-551 Glycine max
Glyma.16G000100 2.0kb upstream 2.0kb upstream 5573 true Chr16: 552-6124 Glycine max
Glyma.16G000100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4125-6124 Glycine max
Glyma.16G000100 2.0kb downstream 2.0kb downstream 4124 true Chr16: 1-4124 Glycine max
Glyma.16G000100 2.0kb downstream 2.0kb downstream 551 false Chr16: 1-551 Glycine max
Glyma.16G000100 5.0kb upstream 5.0kb upstream 8573 true Chr16: 552-9124 Glycine max
Glyma.16G000100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4125-9124 Glycine max
Glyma.16G000100 5.0kb downstream 5.0kb downstream 4124 true Chr16: 1-4124 Glycine max
Glyma.16G000100 5.0kb downstream 5.0kb downstream 551 false Chr16: 1-551 Glycine max
Glyma.16G000100 10.0kb upstream 10.0kb upstream 13573 true Chr16: 552-14124 Glycine max
Glyma.16G000100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4125-14124 Glycine max
Glyma.16G000100 10.0kb downstream 10.0kb downstream 4124 true Chr16: 1-4124 Glycine max
Glyma.16G000100 10.0kb downstream 10.0kb downstream 551 false Chr16: 1-551 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615379 5273 Angiosperm View MSA
122250252 5265 Fabidae View MSA
123993516 5270 Rosid View MSA
123568283 5271 Pentapetalae View MSA
122603029 5272 Eudicot View MSA
120887573 5274 Embryophyte View MSA
122928327 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.366722 0.0 1.37431    
cufflinks 0.23681 0.0 0.904721 Low  
cufflinks 0.137967 0.0 0.538466 Low Low
cufflinks 0.167435 0.0 0.648906 Low Low
cufflinks 0.300317 0.0 1.13584    
cufflinks 0.725778 0.0 2.6209   High
cufflinks 0.375651 0.0 1.40663    
cufflinks 0.260146 0.0 0.988853    
cufflinks 0.441282 0.0 1.63862    
cufflinks 0.061     Low Low
cufflinks 0.086        
cufflinks 0.133        
cufflinks 0.076     Low  
cufflinks 0.096        
cufflinks 0.319       High
cufflinks 0.072     Low Low
cufflinks 0.089        
cufflinks 0.111     Low  
cufflinks 0.144        
cufflinks 0.098        
cufflinks 0.14        
cufflinks 0.111        
cufflinks 0.124        
cufflinks 0.098        
cufflinks 0.084     Low  
cufflinks 0.116        

0 Strain