Gene : Glyma.16G001700 G. max Wm82.a2.v1
Defline:  (1 of 8) KOG0084 - GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins Genomic Order:  17
Name:  ? Glyma.16G001700 Secondary Identifier:  ? PAC:30560101
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G001700 0.5kb upstream 0.5kb upstream 2772 true Chr16: 96245-99016 Glycine max
Glyma.16G001700 0.5kb upstream 0.5kb upstream 500 false Chr16: 96245-96744 Glycine max
Glyma.16G001700 0.5kb downstream 0.5kb downstream 2772 true Chr16: 96745-99516 Glycine max
Glyma.16G001700 0.5kb downstream 0.5kb downstream 500 false Chr16: 99017-99516 Glycine max
Glyma.16G001700 1.0kb upstream 1.0kb upstream 3272 true Chr16: 95745-99016 Glycine max
Glyma.16G001700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 95745-96744 Glycine max
Glyma.16G001700 1.0kb downstream 1.0kb downstream 3272 true Chr16: 96745-100016 Glycine max
Glyma.16G001700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 99017-100016 Glycine max
Glyma.16G001700 2.0kb upstream 2.0kb upstream 4272 true Chr16: 94745-99016 Glycine max
Glyma.16G001700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 94745-96744 Glycine max
Glyma.16G001700 2.0kb downstream 2.0kb downstream 4272 true Chr16: 96745-101016 Glycine max
Glyma.16G001700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 99017-101016 Glycine max
Glyma.16G001700 5.0kb upstream 5.0kb upstream 7272 true Chr16: 91745-99016 Glycine max
Glyma.16G001700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 91745-96744 Glycine max
Glyma.16G001700 5.0kb downstream 5.0kb downstream 7272 true Chr16: 96745-104016 Glycine max
Glyma.16G001700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 99017-104016 Glycine max
Glyma.16G001700 10.0kb upstream 10.0kb upstream 12272 true Chr16: 86745-99016 Glycine max
Glyma.16G001700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 86745-96744 Glycine max
Glyma.16G001700 10.0kb downstream 10.0kb downstream 12272 true Chr16: 96745-109016 Glycine max
Glyma.16G001700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 99017-109016 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307543 5265 Fabidae View MSA
124069076 5270 Rosid View MSA
123751824 5271 Pentapetalae View MSA
122790166 5272 Eudicot View MSA
122051400 5273 Angiosperm View MSA
121350724 5274 Embryophyte View MSA
123381858 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.8727 0.0 121.833 High  
cufflinks 29.821 0.0 134.457 High  
cufflinks 20.2274 0.0 92.4533 High Low
cufflinks 34.3289 0.0 155.344 High  
cufflinks 30.5519 0.0 136.863 High  
cufflinks 21.9578 0.0 90.7662   Low
cufflinks 35.7621 0.0 162.627 High  
cufflinks 46.4384 0.0 213.264 High High
cufflinks 39.4128 0.0 178.046 High  
cufflinks 3.483        
cufflinks 1.321       Low
cufflinks 3.324        
cufflinks 3.808        
cufflinks 3.799        
cufflinks 2.537        
cufflinks 2.77        
cufflinks 2.449        
cufflinks 4.064       High
cufflinks 3.594        
cufflinks 3.311        
cufflinks 1.7       Low
cufflinks 3.299        
cufflinks 2.97        
cufflinks 1.261       Low
cufflinks 2.86        
cufflinks 2.352        

0 Strain