Gene : Glyma.16G002300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13112:SF0 - FI21285P1 Genomic Order:  23
Name:  ? Glyma.16G002300 Secondary Identifier:  ? PAC:30559654
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G002300 0.5kb upstream 0.5kb upstream 7271 true Chr16: 114307-121577 Glycine max
Glyma.16G002300 0.5kb upstream 0.5kb upstream 500 false Chr16: 114307-114806 Glycine max
Glyma.16G002300 0.5kb downstream 0.5kb downstream 7271 true Chr16: 114807-122077 Glycine max
Glyma.16G002300 0.5kb downstream 0.5kb downstream 500 false Chr16: 121578-122077 Glycine max
Glyma.16G002300 1.0kb upstream 1.0kb upstream 7771 true Chr16: 113807-121577 Glycine max
Glyma.16G002300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 113807-114806 Glycine max
Glyma.16G002300 1.0kb downstream 1.0kb downstream 7771 true Chr16: 114807-122577 Glycine max
Glyma.16G002300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 121578-122577 Glycine max
Glyma.16G002300 2.0kb upstream 2.0kb upstream 8771 true Chr16: 112807-121577 Glycine max
Glyma.16G002300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 112807-114806 Glycine max
Glyma.16G002300 2.0kb downstream 2.0kb downstream 8771 true Chr16: 114807-123577 Glycine max
Glyma.16G002300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 121578-123577 Glycine max
Glyma.16G002300 5.0kb upstream 5.0kb upstream 11771 true Chr16: 109807-121577 Glycine max
Glyma.16G002300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 109807-114806 Glycine max
Glyma.16G002300 5.0kb downstream 5.0kb downstream 11771 true Chr16: 114807-126577 Glycine max
Glyma.16G002300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 121578-126577 Glycine max
Glyma.16G002300 10.0kb upstream 10.0kb upstream 16771 true Chr16: 104807-121577 Glycine max
Glyma.16G002300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 104807-114806 Glycine max
Glyma.16G002300 10.0kb downstream 10.0kb downstream 16771 true Chr16: 114807-131577 Glycine max
Glyma.16G002300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 121578-131577 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041498 5273 Angiosperm View MSA
122300753 5265 Fabidae View MSA
124070961 5270 Rosid View MSA
123750498 5271 Pentapetalae View MSA
122788511 5272 Eudicot View MSA
121351189 5274 Embryophyte View MSA
123425600 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3808 0.0 35.7499    
cufflinks 10.1121 0.0 26.9921    
cufflinks 18.6229 0.0 50.4506   High
cufflinks 11.2358 0.0 29.9759    
cufflinks 7.86404 0.0 21.1275   Low
cufflinks 10.013 0.0 26.7318    
cufflinks 13.2379 0.0 35.3547    
cufflinks 10.64 0.0 28.3889    
cufflinks 8.89885 0.0 23.8038    
cufflinks 4.008       Low
cufflinks 4.805        
cufflinks 6.945       High
cufflinks 4.513        
cufflinks 4.313        
cufflinks 3.779       Low
cufflinks 6.009        
cufflinks 3.546       Low
cufflinks 7.983     High High
cufflinks 6.524        
cufflinks 6.729        
cufflinks 4.339        
cufflinks 7.709     High High
cufflinks 5.923        
cufflinks 5.58        
cufflinks 6.292        
cufflinks 3.907       Low

0 Strain