Gene : Glyma.15G267100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11489:SF9 - 40S RIBOSOMAL PROTEIN SA Genomic Order:  2671
Name:  ? Glyma.15G267100 Secondary Identifier:  ? PAC:30497114
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G267100 0.5kb upstream 0.5kb upstream 3192 true Chr15: 50345110-50348301 Glycine max
Glyma.15G267100 0.5kb upstream 0.5kb upstream 500 false Chr15: 50347802-50348301 Glycine max
Glyma.15G267100 0.5kb downstream 0.5kb downstream 3192 true Chr15: 50344610-50347801 Glycine max
Glyma.15G267100 0.5kb downstream 0.5kb downstream 500 false Chr15: 50344610-50345109 Glycine max
Glyma.15G267100 1.0kb upstream 1.0kb upstream 3692 true Chr15: 50345110-50348801 Glycine max
Glyma.15G267100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 50347802-50348801 Glycine max
Glyma.15G267100 1.0kb downstream 1.0kb downstream 3692 true Chr15: 50344110-50347801 Glycine max
Glyma.15G267100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 50344110-50345109 Glycine max
Glyma.15G267100 2.0kb upstream 2.0kb upstream 4692 true Chr15: 50345110-50349801 Glycine max
Glyma.15G267100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 50347802-50349801 Glycine max
Glyma.15G267100 2.0kb downstream 2.0kb downstream 4692 true Chr15: 50343110-50347801 Glycine max
Glyma.15G267100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 50343110-50345109 Glycine max
Glyma.15G267100 5.0kb upstream 5.0kb upstream 7692 true Chr15: 50345110-50352801 Glycine max
Glyma.15G267100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 50347802-50352801 Glycine max
Glyma.15G267100 5.0kb downstream 5.0kb downstream 7692 true Chr15: 50340110-50347801 Glycine max
Glyma.15G267100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 50340110-50345109 Glycine max
Glyma.15G267100 10.0kb upstream 10.0kb upstream 12692 true Chr15: 50345110-50357801 Glycine max
Glyma.15G267100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 50347802-50357801 Glycine max
Glyma.15G267100 10.0kb downstream 10.0kb downstream 12692 true Chr15: 50335110-50347801 Glycine max
Glyma.15G267100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 50335110-50345109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255021 5265 Fabidae View MSA
124069184 5270 Rosid View MSA
123743040 5271 Pentapetalae View MSA
122796033 5272 Eudicot View MSA
122048402 5273 Angiosperm View MSA
121346031 5274 Embryophyte View MSA
123424876 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.6538 0.0 55.1258    
cufflinks 24.9894 0.0 66.6905 High  
cufflinks 9.2657 0.0 25.7628   Low
cufflinks 20.4676 0.0 54.6357 High  
cufflinks 66.8766 0.0 190.848 High High
cufflinks 35.3596 0.0 95.3678 High  
cufflinks 27.7123 0.0 74.1148 High  
cufflinks 24.6494 0.0 65.7925 High  
cufflinks 29.3405 0.0 78.5623 High  
cufflinks 12.794     High  
cufflinks 2.528       Low
cufflinks 8.024     High  
cufflinks 42.891     High High
cufflinks 62.231     High High
cufflinks 2.495       Low
cufflinks 7.229     High  
cufflinks 7.838     High  
cufflinks 7.795     High  
cufflinks 16.349     High  
cufflinks 5.318        
cufflinks 3.989        
cufflinks 5.951        
cufflinks 12.381     High  
cufflinks 3.129       Low
cufflinks 5.667        
cufflinks 6.665     High  

0 Strain