Gene : Glyma.15G268000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23070//PTHR23070:SF43 - BCS1 AAA-TYPE ATPASE Genomic Order:  2680
Name:  ? Glyma.15G268000 Secondary Identifier:  ? PAC:30495798
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G268000 0.5kb upstream 0.5kb upstream 2122 true Chr15: 50433797-50435918 Glycine max
Glyma.15G268000 0.5kb upstream 0.5kb upstream 500 false Chr15: 50433797-50434296 Glycine max
Glyma.15G268000 0.5kb downstream 0.5kb downstream 2122 true Chr15: 50434297-50436418 Glycine max
Glyma.15G268000 0.5kb downstream 0.5kb downstream 500 false Chr15: 50435919-50436418 Glycine max
Glyma.15G268000 1.0kb upstream 1.0kb upstream 2622 true Chr15: 50433297-50435918 Glycine max
Glyma.15G268000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 50433297-50434296 Glycine max
Glyma.15G268000 1.0kb downstream 1.0kb downstream 2622 true Chr15: 50434297-50436918 Glycine max
Glyma.15G268000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 50435919-50436918 Glycine max
Glyma.15G268000 2.0kb upstream 2.0kb upstream 3622 true Chr15: 50432297-50435918 Glycine max
Glyma.15G268000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 50432297-50434296 Glycine max
Glyma.15G268000 2.0kb downstream 2.0kb downstream 3622 true Chr15: 50434297-50437918 Glycine max
Glyma.15G268000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 50435919-50437918 Glycine max
Glyma.15G268000 5.0kb upstream 5.0kb upstream 6622 true Chr15: 50429297-50435918 Glycine max
Glyma.15G268000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 50429297-50434296 Glycine max
Glyma.15G268000 5.0kb downstream 5.0kb downstream 6622 true Chr15: 50434297-50440918 Glycine max
Glyma.15G268000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 50435919-50440918 Glycine max
Glyma.15G268000 10.0kb upstream 10.0kb upstream 11622 true Chr15: 50424297-50435918 Glycine max
Glyma.15G268000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 50424297-50434296 Glycine max
Glyma.15G268000 10.0kb downstream 10.0kb downstream 11622 true Chr15: 50434297-50445918 Glycine max
Glyma.15G268000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 50435919-50445918 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308934 5265 Fabidae View MSA
124070081 5270 Rosid View MSA
123742701 5271 Pentapetalae View MSA
122796053 5272 Eudicot View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.04218 0.0 14.7725    
cufflinks 3.48019 0.0 10.8255    
cufflinks 10.3524 0.0 28.4826   High
cufflinks 3.20283 0.0 10.0714    
cufflinks 2.88606 0.0 9.03328    
cufflinks 2.01293 0.0 6.68523   Low
cufflinks 3.23342 0.0 10.013    
cufflinks 2.39831 0.0 7.86128    
cufflinks 2.53292 0.0 8.17354    
cufflinks 1.372        
cufflinks 0.213       Low
cufflinks 1.929        
cufflinks 1.462        
cufflinks 1.131        
cufflinks 0.047     Low Low
cufflinks 4.259        
cufflinks 0.93        
cufflinks 2.72        
cufflinks 1.802        
cufflinks 5.375       High
cufflinks 0.363        
cufflinks 4.024        
cufflinks 4.903       High
cufflinks 0.162       Low
cufflinks 4.658       High
cufflinks 0.432        

0 Strain