Gene : Glyma.15G268800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12741:SF9 - CALLOSE SYNTHASE 1-RELATED Genomic Order:  2688
Name:  ? Glyma.15G268800 Secondary Identifier:  ? PAC:30496848
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6773 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G268800 0.5kb upstream 0.5kb upstream 19898 true Chr15: 50529095-50548992 Glycine max
Glyma.15G268800 0.5kb upstream 0.5kb upstream 500 false Chr15: 50529095-50529594 Glycine max
Glyma.15G268800 0.5kb downstream 0.5kb downstream 19898 true Chr15: 50529595-50549492 Glycine max
Glyma.15G268800 0.5kb downstream 0.5kb downstream 500 false Chr15: 50548993-50549492 Glycine max
Glyma.15G268800 1.0kb upstream 1.0kb upstream 20398 true Chr15: 50528595-50548992 Glycine max
Glyma.15G268800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 50528595-50529594 Glycine max
Glyma.15G268800 1.0kb downstream 1.0kb downstream 20398 true Chr15: 50529595-50549992 Glycine max
Glyma.15G268800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 50548993-50549992 Glycine max
Glyma.15G268800 2.0kb upstream 2.0kb upstream 21398 true Chr15: 50527595-50548992 Glycine max
Glyma.15G268800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 50527595-50529594 Glycine max
Glyma.15G268800 2.0kb downstream 2.0kb downstream 21398 true Chr15: 50529595-50550992 Glycine max
Glyma.15G268800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 50548993-50550992 Glycine max
Glyma.15G268800 5.0kb upstream 5.0kb upstream 24398 true Chr15: 50524595-50548992 Glycine max
Glyma.15G268800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 50524595-50529594 Glycine max
Glyma.15G268800 5.0kb downstream 5.0kb downstream 24398 true Chr15: 50529595-50553992 Glycine max
Glyma.15G268800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 50548993-50553992 Glycine max
Glyma.15G268800 10.0kb upstream 10.0kb upstream 29398 true Chr15: 50519595-50548992 Glycine max
Glyma.15G268800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 50519595-50529594 Glycine max
Glyma.15G268800 10.0kb downstream 10.0kb downstream 29398 true Chr15: 50529595-50558992 Glycine max
Glyma.15G268800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 50548993-50558992 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296508 5265 Fabidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.739 0.0 112.976    
cufflinks 7.84769 0.0 36.9703    
cufflinks 42.2651 0.0 355.638 High High
cufflinks 9.8566 0.0 46.9644    
cufflinks 11.2768 0.0 46.2172    
cufflinks 5.03772 0.0 17.1471   Low
cufflinks 2.91689 0.0 11.5547   Low
cufflinks 14.2184 0.0 62.2492    
cufflinks 15.9875 0.0 79.1343    
cufflinks 0.648        
cufflinks 1.695       High
cufflinks 2.038       High
cufflinks 1.05        
cufflinks 0.495       Low
cufflinks 0.787        
cufflinks 0.761        
cufflinks 1.438        
cufflinks 1.653       High
cufflinks 0.783        
cufflinks 0.654        
cufflinks 1.752       High
cufflinks 0.904        
cufflinks 0.458       Low
cufflinks 2.234       High
cufflinks 0.719        
cufflinks 0.973        

0 Strain