Gene : Glyma.15G269500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10917//PTHR10917:SF1 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3 Genomic Order:  2695
Name:  ? Glyma.15G269500 Secondary Identifier:  ? PAC:30499946
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G269500 0.5kb upstream 0.5kb upstream 3714 true Chr15: 50645898-50649611 Glycine max
Glyma.15G269500 0.5kb upstream 0.5kb upstream 500 false Chr15: 50649112-50649611 Glycine max
Glyma.15G269500 0.5kb downstream 0.5kb downstream 3714 true Chr15: 50645398-50649111 Glycine max
Glyma.15G269500 0.5kb downstream 0.5kb downstream 500 false Chr15: 50645398-50645897 Glycine max
Glyma.15G269500 1.0kb upstream 1.0kb upstream 4214 true Chr15: 50645898-50650111 Glycine max
Glyma.15G269500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 50649112-50650111 Glycine max
Glyma.15G269500 1.0kb downstream 1.0kb downstream 4214 true Chr15: 50644898-50649111 Glycine max
Glyma.15G269500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 50644898-50645897 Glycine max
Glyma.15G269500 2.0kb upstream 2.0kb upstream 5214 true Chr15: 50645898-50651111 Glycine max
Glyma.15G269500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 50649112-50651111 Glycine max
Glyma.15G269500 2.0kb downstream 2.0kb downstream 5214 true Chr15: 50643898-50649111 Glycine max
Glyma.15G269500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 50643898-50645897 Glycine max
Glyma.15G269500 5.0kb upstream 5.0kb upstream 8214 true Chr15: 50645898-50654111 Glycine max
Glyma.15G269500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 50649112-50654111 Glycine max
Glyma.15G269500 5.0kb downstream 5.0kb downstream 8214 true Chr15: 50640898-50649111 Glycine max
Glyma.15G269500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 50640898-50645897 Glycine max
Glyma.15G269500 10.0kb upstream 10.0kb upstream 13214 true Chr15: 50645898-50659111 Glycine max
Glyma.15G269500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 50649112-50659111 Glycine max
Glyma.15G269500 10.0kb downstream 10.0kb downstream 13214 true Chr15: 50635898-50649111 Glycine max
Glyma.15G269500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 50635898-50645897 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302029 5265 Fabidae View MSA
124037513 5270 Rosid View MSA
123742765 5271 Pentapetalae View MSA
122785974 5272 Eudicot View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7016 0.0 33.7405    
cufflinks 12.6087 0.0 35.9217    
cufflinks 6.38957 0.0 19.9107   Low
cufflinks 9.66923 0.0 28.489    
cufflinks 12.7231 0.0 36.3687    
cufflinks 11.3564 0.0 32.846    
cufflinks 14.5263 0.0 41.0433   High
cufflinks 11.0858 0.0 32.0533    
cufflinks 10.5627 0.0 30.7626    
cufflinks 4.263        
cufflinks 1.627       Low
cufflinks 2.637        
cufflinks 3.384        
cufflinks 4.275        
cufflinks 2.519        
cufflinks 4.621        
cufflinks 1.991       Low
cufflinks 3.567        
cufflinks 3.344        
cufflinks 6.233       High
cufflinks 1.79       Low
cufflinks 5.171       High
cufflinks 4.616        
cufflinks 1.869       Low
cufflinks 5.69       High
cufflinks 2.231        

0 Strain