Gene : Glyma.15G271400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10024:SF256 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  2714
Name:  ? Glyma.15G271400 Secondary Identifier:  ? PAC:30496843
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G271400 0.5kb upstream 0.5kb upstream 4211 true Chr15: 50861709-50865919 Glycine max
Glyma.15G271400 0.5kb upstream 0.5kb upstream 500 false Chr15: 50865420-50865919 Glycine max
Glyma.15G271400 0.5kb downstream 0.5kb downstream 4211 true Chr15: 50861209-50865419 Glycine max
Glyma.15G271400 0.5kb downstream 0.5kb downstream 500 false Chr15: 50861209-50861708 Glycine max
Glyma.15G271400 1.0kb upstream 1.0kb upstream 4711 true Chr15: 50861709-50866419 Glycine max
Glyma.15G271400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 50865420-50866419 Glycine max
Glyma.15G271400 1.0kb downstream 1.0kb downstream 4711 true Chr15: 50860709-50865419 Glycine max
Glyma.15G271400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 50860709-50861708 Glycine max
Glyma.15G271400 2.0kb upstream 2.0kb upstream 5711 true Chr15: 50861709-50867419 Glycine max
Glyma.15G271400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 50865420-50867419 Glycine max
Glyma.15G271400 2.0kb downstream 2.0kb downstream 5711 true Chr15: 50859709-50865419 Glycine max
Glyma.15G271400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 50859709-50861708 Glycine max
Glyma.15G271400 5.0kb upstream 5.0kb upstream 8711 true Chr15: 50861709-50870419 Glycine max
Glyma.15G271400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 50865420-50870419 Glycine max
Glyma.15G271400 5.0kb downstream 5.0kb downstream 8711 true Chr15: 50856709-50865419 Glycine max
Glyma.15G271400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 50856709-50861708 Glycine max
Glyma.15G271400 10.0kb upstream 10.0kb upstream 13711 true Chr15: 50861709-50875419 Glycine max
Glyma.15G271400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 50865420-50875419 Glycine max
Glyma.15G271400 10.0kb downstream 10.0kb downstream 13711 true Chr15: 50851709-50865419 Glycine max
Glyma.15G271400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 50851709-50861708 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311480 5265 Fabidae View MSA
124069332 5270 Rosid View MSA
123741936 5271 Pentapetalae View MSA
122796289 5272 Eudicot View MSA
122048920 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0688922 0.0 0.268062 Low  
cufflinks 0.103689 0.0 0.396485 Low  
cufflinks 0.062595 0.0 0.244306 Low Low
cufflinks 0.167714 0.0 0.627096 Low  
cufflinks 0.397634 0.0 1.41483   High
cufflinks 0.0786777 0.0 0.304397 Low  
cufflinks 0.08309 0.0 0.320671 Low  
cufflinks 0.164026 0.0 0.613633 Low  
cufflinks 0.26897 0.0 0.98198   High
cufflinks 0.367        
cufflinks 0.294        
cufflinks 0.278        
cufflinks 1.12       High
cufflinks 0.732        
cufflinks 0.015     Low Low
cufflinks 0.439        
cufflinks 0.115       Low
cufflinks 0.555        
cufflinks 0.303        
cufflinks 0.528        
cufflinks 0.374        
cufflinks 0.539        
cufflinks 0.275        
cufflinks 0.176        
cufflinks 0.438        
cufflinks 0.254        

0 Strain