Gene : Glyma.15G271900 G. max Wm82.a2.v1
Defline:  (1 of 309) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  2719
Name:  ? Glyma.15G271900 Secondary Identifier:  ? PAC:30499658
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G271900 0.5kb upstream 0.5kb upstream 3577 true Chr15: 50912530-50916106 Glycine max
Glyma.15G271900 0.5kb upstream 0.5kb upstream 500 false Chr15: 50915607-50916106 Glycine max
Glyma.15G271900 0.5kb downstream 0.5kb downstream 3577 true Chr15: 50912030-50915606 Glycine max
Glyma.15G271900 0.5kb downstream 0.5kb downstream 500 false Chr15: 50912030-50912529 Glycine max
Glyma.15G271900 1.0kb upstream 1.0kb upstream 4077 true Chr15: 50912530-50916606 Glycine max
Glyma.15G271900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 50915607-50916606 Glycine max
Glyma.15G271900 1.0kb downstream 1.0kb downstream 4077 true Chr15: 50911530-50915606 Glycine max
Glyma.15G271900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 50911530-50912529 Glycine max
Glyma.15G271900 2.0kb upstream 2.0kb upstream 5077 true Chr15: 50912530-50917606 Glycine max
Glyma.15G271900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 50915607-50917606 Glycine max
Glyma.15G271900 2.0kb downstream 2.0kb downstream 5077 true Chr15: 50910530-50915606 Glycine max
Glyma.15G271900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 50910530-50912529 Glycine max
Glyma.15G271900 5.0kb upstream 5.0kb upstream 8077 true Chr15: 50912530-50920606 Glycine max
Glyma.15G271900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 50915607-50920606 Glycine max
Glyma.15G271900 5.0kb downstream 5.0kb downstream 8077 true Chr15: 50907530-50915606 Glycine max
Glyma.15G271900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 50907530-50912529 Glycine max
Glyma.15G271900 10.0kb upstream 10.0kb upstream 13077 true Chr15: 50912530-50925606 Glycine max
Glyma.15G271900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 50915607-50925606 Glycine max
Glyma.15G271900 10.0kb downstream 10.0kb downstream 13077 true Chr15: 50902530-50915606 Glycine max
Glyma.15G271900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 50902530-50912529 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311169 5265 Fabidae View MSA
124073794 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.3764 0.0 97.9763 High High
cufflinks 1.52578 0.0 7.67394    
cufflinks 5.90691 0.0 26.1028    
cufflinks 0.188395 0.0 1.35549   Low
cufflinks 1.4854 0.0 7.5682    
cufflinks 11.4561 0.0 39.8046   High
cufflinks 0.12173 0.0 0.478302 Low Low
cufflinks 1.06227 0.0 7.0197    
cufflinks 1.95277 0.0 11.1202    
cufflinks 0.666       Low
cufflinks 40.114     High High
cufflinks 2.178        
cufflinks 1.254        
cufflinks 1.159        
cufflinks 8.966     High  
cufflinks 2.234        
cufflinks 36.931     High High
cufflinks 0.441       Low
cufflinks 0.74        
cufflinks 1.982        
cufflinks 93.413     High High
cufflinks 2.828        
cufflinks 1.438        
cufflinks 44.371     High High
cufflinks 1.4        
cufflinks 119.536     High High

0 Strain