Gene : Glyma.15G265000 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2650
Name:  ? Glyma.15G265000 Secondary Identifier:  ? PAC:30498045
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G265000 0.5kb upstream 0.5kb upstream 2884 true Chr15: 49898864-49901747 Glycine max
Glyma.15G265000 0.5kb upstream 0.5kb upstream 500 false Chr15: 49898864-49899363 Glycine max
Glyma.15G265000 0.5kb downstream 0.5kb downstream 2884 true Chr15: 49899364-49902247 Glycine max
Glyma.15G265000 0.5kb downstream 0.5kb downstream 500 false Chr15: 49901748-49902247 Glycine max
Glyma.15G265000 1.0kb upstream 1.0kb upstream 3384 true Chr15: 49898364-49901747 Glycine max
Glyma.15G265000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 49898364-49899363 Glycine max
Glyma.15G265000 1.0kb downstream 1.0kb downstream 3384 true Chr15: 49899364-49902747 Glycine max
Glyma.15G265000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 49901748-49902747 Glycine max
Glyma.15G265000 2.0kb upstream 2.0kb upstream 4384 true Chr15: 49897364-49901747 Glycine max
Glyma.15G265000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 49897364-49899363 Glycine max
Glyma.15G265000 2.0kb downstream 2.0kb downstream 4384 true Chr15: 49899364-49903747 Glycine max
Glyma.15G265000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 49901748-49903747 Glycine max
Glyma.15G265000 5.0kb upstream 5.0kb upstream 7384 true Chr15: 49894364-49901747 Glycine max
Glyma.15G265000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 49894364-49899363 Glycine max
Glyma.15G265000 5.0kb downstream 5.0kb downstream 7384 true Chr15: 49899364-49906747 Glycine max
Glyma.15G265000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 49901748-49906747 Glycine max
Glyma.15G265000 10.0kb upstream 10.0kb upstream 12384 true Chr15: 49889364-49901747 Glycine max
Glyma.15G265000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 49889364-49899363 Glycine max
Glyma.15G265000 10.0kb downstream 10.0kb downstream 12384 true Chr15: 49899364-49911747 Glycine max
Glyma.15G265000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 49901748-49911747 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302359 5265 Fabidae View MSA
124066946 5270 Rosid View MSA
123748514 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.86292 0.0 6.18811    
cufflinks 2.69968 0.0 8.5132   High
cufflinks 0.643514 0.0 2.34246   Low
cufflinks 1.32606 0.0 4.57433    
cufflinks 2.15783 0.0 7.03252    
cufflinks 1.43773 0.0 4.92101    
cufflinks 1.88782 0.0 6.26718    
cufflinks 1.29567 0.0 4.47699    
cufflinks 3.06206 0.0 9.4758   High
cufflinks 1.367        
cufflinks 0.35       Low
cufflinks 1.036        
cufflinks 1.271        
cufflinks 1.933       High
cufflinks 0.593        
cufflinks 1.285        
cufflinks 0.544        
cufflinks 1.213        
cufflinks 1.752       High
cufflinks 0.909        
cufflinks 0.344       Low
cufflinks 1.204        
cufflinks 1.14        
cufflinks 0.367       Low
cufflinks 1.066        
cufflinks 0.34       Low

0 Strain