Gene : Glyma.15G266500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31989:SF48 - PROTEIN SOMBRERO Genomic Order:  2665
Name:  ? Glyma.15G266500 Secondary Identifier:  ? PAC:30498490
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G266500 0.5kb upstream 0.5kb upstream 4586 true Chr15: 50221349-50225934 Glycine max
Glyma.15G266500 0.5kb upstream 0.5kb upstream 500 false Chr15: 50221349-50221848 Glycine max
Glyma.15G266500 0.5kb downstream 0.5kb downstream 4586 true Chr15: 50221849-50226434 Glycine max
Glyma.15G266500 0.5kb downstream 0.5kb downstream 500 false Chr15: 50225935-50226434 Glycine max
Glyma.15G266500 1.0kb upstream 1.0kb upstream 5086 true Chr15: 50220849-50225934 Glycine max
Glyma.15G266500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 50220849-50221848 Glycine max
Glyma.15G266500 1.0kb downstream 1.0kb downstream 5086 true Chr15: 50221849-50226934 Glycine max
Glyma.15G266500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 50225935-50226934 Glycine max
Glyma.15G266500 2.0kb upstream 2.0kb upstream 6086 true Chr15: 50219849-50225934 Glycine max
Glyma.15G266500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 50219849-50221848 Glycine max
Glyma.15G266500 2.0kb downstream 2.0kb downstream 6086 true Chr15: 50221849-50227934 Glycine max
Glyma.15G266500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 50225935-50227934 Glycine max
Glyma.15G266500 5.0kb upstream 5.0kb upstream 9086 true Chr15: 50216849-50225934 Glycine max
Glyma.15G266500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 50216849-50221848 Glycine max
Glyma.15G266500 5.0kb downstream 5.0kb downstream 9086 true Chr15: 50221849-50230934 Glycine max
Glyma.15G266500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 50225935-50230934 Glycine max
Glyma.15G266500 10.0kb upstream 10.0kb upstream 14086 true Chr15: 50211849-50225934 Glycine max
Glyma.15G266500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 50211849-50221848 Glycine max
Glyma.15G266500 10.0kb downstream 10.0kb downstream 14086 true Chr15: 50221849-50235934 Glycine max
Glyma.15G266500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 50225935-50235934 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299411 5265 Fabidae View MSA
124063722 5270 Rosid View MSA
123740377 5271 Pentapetalae View MSA
122788631 5272 Eudicot View MSA
122045964 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.030669 0.0 0.137165 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0244259 0.0 0.108625 Low  
cufflinks 4.61087 0.0 18.2122    
cufflinks 13.8974 0.0 49.6964   High
cufflinks 0.540492 0.0 3.53288    
cufflinks 0.0152042 0.0 0.0789832 Low Low
cufflinks 2.87933 0.0 13.3702    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.342        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.424        
cufflinks 2.652        
cufflinks 0.043     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.32        
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.914        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.622        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.6        

0 Strain