Gene : Glyma.15G254100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23105:SF31 - RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  2541
Name:  ? Glyma.15G254100 Secondary Identifier:  ? PAC:30497769
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G254100 0.5kb upstream 0.5kb upstream 2563 true Chr15: 48310048-48312610 Glycine max
Glyma.15G254100 0.5kb upstream 0.5kb upstream 500 false Chr15: 48312111-48312610 Glycine max
Glyma.15G254100 0.5kb downstream 0.5kb downstream 2563 true Chr15: 48309548-48312110 Glycine max
Glyma.15G254100 0.5kb downstream 0.5kb downstream 500 false Chr15: 48309548-48310047 Glycine max
Glyma.15G254100 1.0kb upstream 1.0kb upstream 3063 true Chr15: 48310048-48313110 Glycine max
Glyma.15G254100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 48312111-48313110 Glycine max
Glyma.15G254100 1.0kb downstream 1.0kb downstream 3063 true Chr15: 48309048-48312110 Glycine max
Glyma.15G254100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 48309048-48310047 Glycine max
Glyma.15G254100 2.0kb upstream 2.0kb upstream 4063 true Chr15: 48310048-48314110 Glycine max
Glyma.15G254100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 48312111-48314110 Glycine max
Glyma.15G254100 2.0kb downstream 2.0kb downstream 4063 true Chr15: 48308048-48312110 Glycine max
Glyma.15G254100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 48308048-48310047 Glycine max
Glyma.15G254100 5.0kb upstream 5.0kb upstream 7063 true Chr15: 48310048-48317110 Glycine max
Glyma.15G254100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 48312111-48317110 Glycine max
Glyma.15G254100 5.0kb downstream 5.0kb downstream 7063 true Chr15: 48305048-48312110 Glycine max
Glyma.15G254100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 48305048-48310047 Glycine max
Glyma.15G254100 10.0kb upstream 10.0kb upstream 12063 true Chr15: 48310048-48322110 Glycine max
Glyma.15G254100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 48312111-48322110 Glycine max
Glyma.15G254100 10.0kb downstream 10.0kb downstream 12063 true Chr15: 48300048-48312110 Glycine max
Glyma.15G254100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 48300048-48310047 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308083 5265 Fabidae View MSA
124067749 5270 Rosid View MSA
123741990 5271 Pentapetalae View MSA
122792570 5272 Eudicot View MSA
122042558 5273 Angiosperm View MSA
121347008 5274 Embryophyte View MSA
123426351 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7719 0.0 28.7634   High
cufflinks 6.80959 0.0 18.5125    
cufflinks 2.8218 0.0 8.37887   Low
cufflinks 4.32051 0.0 12.1917    
cufflinks 11.6327 0.0 31.0395   High
cufflinks 4.73921 0.0 13.2388    
cufflinks 6.85356 0.0 18.6026    
cufflinks 7.48156 0.0 20.2196    
cufflinks 6.55202 0.0 17.8393    
cufflinks 8.098     High  
cufflinks 1.965       Low
cufflinks 8.073     High  
cufflinks 20.226     High High
cufflinks 32.719     High High
cufflinks 1.142       Low
cufflinks 5.487        
cufflinks 8.224     High  
cufflinks 7.084        
cufflinks 13.954     High High
cufflinks 3.115        
cufflinks 2.001       Low
cufflinks 4.322        
cufflinks 9.609     High  
cufflinks 1.598       Low
cufflinks 4.294        
cufflinks 4.523        

0 Strain