Gene : Glyma.15G254600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 Genomic Order:  2546
Name:  ? Glyma.15G254600 Secondary Identifier:  ? PAC:30499007
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G254600 0.5kb upstream 0.5kb upstream 3986 true Chr15: 48374857-48378842 Glycine max
Glyma.15G254600 0.5kb upstream 0.5kb upstream 500 false Chr15: 48374857-48375356 Glycine max
Glyma.15G254600 0.5kb downstream 0.5kb downstream 3986 true Chr15: 48375357-48379342 Glycine max
Glyma.15G254600 0.5kb downstream 0.5kb downstream 500 false Chr15: 48378843-48379342 Glycine max
Glyma.15G254600 1.0kb upstream 1.0kb upstream 4486 true Chr15: 48374357-48378842 Glycine max
Glyma.15G254600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 48374357-48375356 Glycine max
Glyma.15G254600 1.0kb downstream 1.0kb downstream 4486 true Chr15: 48375357-48379842 Glycine max
Glyma.15G254600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 48378843-48379842 Glycine max
Glyma.15G254600 2.0kb upstream 2.0kb upstream 5486 true Chr15: 48373357-48378842 Glycine max
Glyma.15G254600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 48373357-48375356 Glycine max
Glyma.15G254600 2.0kb downstream 2.0kb downstream 5486 true Chr15: 48375357-48380842 Glycine max
Glyma.15G254600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 48378843-48380842 Glycine max
Glyma.15G254600 5.0kb upstream 5.0kb upstream 8486 true Chr15: 48370357-48378842 Glycine max
Glyma.15G254600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 48370357-48375356 Glycine max
Glyma.15G254600 5.0kb downstream 5.0kb downstream 8486 true Chr15: 48375357-48383842 Glycine max
Glyma.15G254600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 48378843-48383842 Glycine max
Glyma.15G254600 10.0kb upstream 10.0kb upstream 13486 true Chr15: 48365357-48378842 Glycine max
Glyma.15G254600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 48365357-48375356 Glycine max
Glyma.15G254600 10.0kb downstream 10.0kb downstream 13486 true Chr15: 48375357-48388842 Glycine max
Glyma.15G254600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 48378843-48388842 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309330 5265 Fabidae View MSA
124065490 5270 Rosid View MSA
123746583 5271 Pentapetalae View MSA
122790911 5272 Eudicot View MSA
122047376 5273 Angiosperm View MSA
121345088 5274 Embryophyte View MSA
123423767 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.3097 0.0 59.243    
cufflinks 16.8031 0.0 55.1013   Low
cufflinks 17.8397 0.0 69.0274    
cufflinks 16.4501 0.0 67.0972   Low
cufflinks 17.9867 0.0 58.4031    
cufflinks 20.9129 0.0 65.6632   High
cufflinks 20.2929 0.0 70.9046   High
cufflinks 17.3374 0.0 67.3714    
cufflinks 19.935 0.0 73.0967 High  
cufflinks 0.941       Low
cufflinks 1.114        
cufflinks 1.189        
cufflinks 0.988        
cufflinks 1.274       High
cufflinks 0.906       Low
cufflinks 1.051        
cufflinks 0.84       Low
cufflinks 1.391       High
cufflinks 1.166        
cufflinks 1.12        
cufflinks 1.171        
cufflinks 1.09        
cufflinks 1.116        
cufflinks 1.37       High
cufflinks 1.005        
cufflinks 0.972        

0 Strain