Gene : Glyma.15G255800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21043:SF1 - PROTEIN IOJAP, CHLOROPLASTIC Genomic Order:  2558
Name:  ? Glyma.15G255800 Secondary Identifier:  ? PAC:30499975
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G255800 0.5kb upstream 0.5kb upstream 5423 true Chr15: 48508359-48513781 Glycine max
Glyma.15G255800 0.5kb upstream 0.5kb upstream 500 false Chr15: 48513282-48513781 Glycine max
Glyma.15G255800 0.5kb downstream 0.5kb downstream 5423 true Chr15: 48507859-48513281 Glycine max
Glyma.15G255800 0.5kb downstream 0.5kb downstream 500 false Chr15: 48507859-48508358 Glycine max
Glyma.15G255800 1.0kb upstream 1.0kb upstream 5923 true Chr15: 48508359-48514281 Glycine max
Glyma.15G255800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 48513282-48514281 Glycine max
Glyma.15G255800 1.0kb downstream 1.0kb downstream 5923 true Chr15: 48507359-48513281 Glycine max
Glyma.15G255800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 48507359-48508358 Glycine max
Glyma.15G255800 2.0kb upstream 2.0kb upstream 6923 true Chr15: 48508359-48515281 Glycine max
Glyma.15G255800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 48513282-48515281 Glycine max
Glyma.15G255800 2.0kb downstream 2.0kb downstream 6923 true Chr15: 48506359-48513281 Glycine max
Glyma.15G255800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 48506359-48508358 Glycine max
Glyma.15G255800 5.0kb upstream 5.0kb upstream 9923 true Chr15: 48508359-48518281 Glycine max
Glyma.15G255800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 48513282-48518281 Glycine max
Glyma.15G255800 5.0kb downstream 5.0kb downstream 9923 true Chr15: 48503359-48513281 Glycine max
Glyma.15G255800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 48503359-48508358 Glycine max
Glyma.15G255800 10.0kb upstream 10.0kb upstream 14923 true Chr15: 48508359-48523281 Glycine max
Glyma.15G255800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 48513282-48523281 Glycine max
Glyma.15G255800 10.0kb downstream 10.0kb downstream 14923 true Chr15: 48498359-48513281 Glycine max
Glyma.15G255800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 48498359-48508358 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300008 5265 Fabidae View MSA
124067704 5270 Rosid View MSA
123743843 5271 Pentapetalae View MSA
122785584 5272 Eudicot View MSA
122043136 5273 Angiosperm View MSA
121343948 5274 Embryophyte View MSA
123426763 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.3879 0.0 41.5323   High
cufflinks 10.862 0.0 29.9804    
cufflinks 22.673 0.0 60.5133 High High
cufflinks 6.26823 0.0 18.346    
cufflinks 3.25395 0.0 10.4548   Low
cufflinks 3.57774 0.0 11.3241    
cufflinks 4.87224 0.0 14.821    
cufflinks 8.92651 0.0 25.0925    
cufflinks 3.84315 0.0 12.0538    
cufflinks 1.666        
cufflinks 0.543       Low
cufflinks 4.485       High
cufflinks 0.806        
cufflinks 0.752        
cufflinks 0.387       Low
cufflinks 3.764        
cufflinks 0.511       Low
cufflinks 3.242        
cufflinks 2.441        
cufflinks 4.72       High
cufflinks 0.58        
cufflinks 4.667       High
cufflinks 4.129       High
cufflinks 0.723        
cufflinks 3.965        
cufflinks 0.433       Low

0 Strain