Gene : Glyma.15G258600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33109:SF6 - EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 7-RELATED Genomic Order:  2586
Name:  ? Glyma.15G258600 Secondary Identifier:  ? PAC:30498661
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G258600 0.5kb upstream 0.5kb upstream 2343 true Chr15: 48973283-48975625 Glycine max
Glyma.15G258600 0.5kb upstream 0.5kb upstream 500 false Chr15: 48973283-48973782 Glycine max
Glyma.15G258600 0.5kb downstream 0.5kb downstream 2343 true Chr15: 48973783-48976125 Glycine max
Glyma.15G258600 0.5kb downstream 0.5kb downstream 500 false Chr15: 48975626-48976125 Glycine max
Glyma.15G258600 1.0kb upstream 1.0kb upstream 2843 true Chr15: 48972783-48975625 Glycine max
Glyma.15G258600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 48972783-48973782 Glycine max
Glyma.15G258600 1.0kb downstream 1.0kb downstream 2843 true Chr15: 48973783-48976625 Glycine max
Glyma.15G258600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 48975626-48976625 Glycine max
Glyma.15G258600 2.0kb upstream 2.0kb upstream 3843 true Chr15: 48971783-48975625 Glycine max
Glyma.15G258600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 48971783-48973782 Glycine max
Glyma.15G258600 2.0kb downstream 2.0kb downstream 3843 true Chr15: 48973783-48977625 Glycine max
Glyma.15G258600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 48975626-48977625 Glycine max
Glyma.15G258600 5.0kb upstream 5.0kb upstream 6843 true Chr15: 48968783-48975625 Glycine max
Glyma.15G258600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 48968783-48973782 Glycine max
Glyma.15G258600 5.0kb downstream 5.0kb downstream 6843 true Chr15: 48973783-48980625 Glycine max
Glyma.15G258600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 48975626-48980625 Glycine max
Glyma.15G258600 10.0kb upstream 10.0kb upstream 11843 true Chr15: 48963783-48975625 Glycine max
Glyma.15G258600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 48963783-48973782 Glycine max
Glyma.15G258600 10.0kb downstream 10.0kb downstream 11843 true Chr15: 48973783-48985625 Glycine max
Glyma.15G258600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 48975626-48985625 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306056 5265 Fabidae View MSA
124066139 5270 Rosid View MSA
123748045 5271 Pentapetalae View MSA
122792387 5272 Eudicot View MSA
122049179 5273 Angiosperm View MSA
121350118 5274 Embryophyte View MSA
123381585 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.21918 0.0 4.5656    
cufflinks 0.145604 0.0 0.594685 Low  
cufflinks 0.230491 0.0 0.922816    
cufflinks 0.0334162 0.0 0.15352 Low Low
cufflinks 0.438951 0.0 1.71803    
cufflinks 2.15462 0.0 7.83502   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.161        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.944        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.149        
cufflinks 0.404        
cufflinks 5.044        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.205        
cufflinks 8.449     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.952        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain