Gene : Glyma.15G258800 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  2588
Name:  ? Glyma.15G258800 Secondary Identifier:  ? PAC:30498274
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G258800 0.5kb upstream 0.5kb upstream 1626 true Chr15: 49015097-49016722 Glycine max
Glyma.15G258800 0.5kb upstream 0.5kb upstream 500 false Chr15: 49015097-49015596 Glycine max
Glyma.15G258800 0.5kb downstream 0.5kb downstream 1626 true Chr15: 49015597-49017222 Glycine max
Glyma.15G258800 0.5kb downstream 0.5kb downstream 500 false Chr15: 49016723-49017222 Glycine max
Glyma.15G258800 1.0kb upstream 1.0kb upstream 2126 true Chr15: 49014597-49016722 Glycine max
Glyma.15G258800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 49014597-49015596 Glycine max
Glyma.15G258800 1.0kb downstream 1.0kb downstream 2126 true Chr15: 49015597-49017722 Glycine max
Glyma.15G258800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 49016723-49017722 Glycine max
Glyma.15G258800 2.0kb upstream 2.0kb upstream 3126 true Chr15: 49013597-49016722 Glycine max
Glyma.15G258800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 49013597-49015596 Glycine max
Glyma.15G258800 2.0kb downstream 2.0kb downstream 3126 true Chr15: 49015597-49018722 Glycine max
Glyma.15G258800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 49016723-49018722 Glycine max
Glyma.15G258800 5.0kb upstream 5.0kb upstream 6126 true Chr15: 49010597-49016722 Glycine max
Glyma.15G258800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 49010597-49015596 Glycine max
Glyma.15G258800 5.0kb downstream 5.0kb downstream 6126 true Chr15: 49015597-49021722 Glycine max
Glyma.15G258800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 49016723-49021722 Glycine max
Glyma.15G258800 10.0kb upstream 10.0kb upstream 11126 true Chr15: 49005597-49016722 Glycine max
Glyma.15G258800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 49005597-49015596 Glycine max
Glyma.15G258800 10.0kb downstream 10.0kb downstream 11126 true Chr15: 49015597-49026722 Glycine max
Glyma.15G258800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 49016723-49026722 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309775 5265 Fabidae View MSA
124071169 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7608 0.0 33.4499    
cufflinks 5.7008 0.0 17.9138    
cufflinks 8.2321 0.0 24.8079    
cufflinks 18.2909 0.0 50.0032   High
cufflinks 11.5817 0.0 32.7798    
cufflinks 2.77278 0.0 9.52045   Low
cufflinks 3.6232 0.0 12.0544   Low
cufflinks 9.50778 0.0 27.8561    
cufflinks 18.0801 0.0 49.4131   High
cufflinks 1.362        
cufflinks 2.755        
cufflinks 3.38        
cufflinks 0.681       Low
cufflinks 0.231       Low
cufflinks 5.604     High High
cufflinks 1.748        
cufflinks 2.159        
cufflinks 2.912        
cufflinks 2.591        
cufflinks 1.966        
cufflinks 8.804     High High
cufflinks 2.893        
cufflinks 1.608        
cufflinks 5.196        
cufflinks 1.438        
cufflinks 6.667     High High

0 Strain