Gene : Glyma.15G259200 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) Genomic Order:  2592
Name:  ? Glyma.15G259200 Secondary Identifier:  ? PAC:30498174
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G259200 0.5kb upstream 0.5kb upstream 5028 true Chr15: 49150684-49155711 Glycine max
Glyma.15G259200 0.5kb upstream 0.5kb upstream 500 false Chr15: 49150684-49151183 Glycine max
Glyma.15G259200 0.5kb downstream 0.5kb downstream 5028 true Chr15: 49151184-49156211 Glycine max
Glyma.15G259200 0.5kb downstream 0.5kb downstream 500 false Chr15: 49155712-49156211 Glycine max
Glyma.15G259200 1.0kb upstream 1.0kb upstream 5528 true Chr15: 49150184-49155711 Glycine max
Glyma.15G259200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 49150184-49151183 Glycine max
Glyma.15G259200 1.0kb downstream 1.0kb downstream 5528 true Chr15: 49151184-49156711 Glycine max
Glyma.15G259200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 49155712-49156711 Glycine max
Glyma.15G259200 2.0kb upstream 2.0kb upstream 6528 true Chr15: 49149184-49155711 Glycine max
Glyma.15G259200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 49149184-49151183 Glycine max
Glyma.15G259200 2.0kb downstream 2.0kb downstream 6528 true Chr15: 49151184-49157711 Glycine max
Glyma.15G259200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 49155712-49157711 Glycine max
Glyma.15G259200 5.0kb upstream 5.0kb upstream 9528 true Chr15: 49146184-49155711 Glycine max
Glyma.15G259200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 49146184-49151183 Glycine max
Glyma.15G259200 5.0kb downstream 5.0kb downstream 9528 true Chr15: 49151184-49160711 Glycine max
Glyma.15G259200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 49155712-49160711 Glycine max
Glyma.15G259200 10.0kb upstream 10.0kb upstream 14528 true Chr15: 49141184-49155711 Glycine max
Glyma.15G259200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 49141184-49151183 Glycine max
Glyma.15G259200 10.0kb downstream 10.0kb downstream 14528 true Chr15: 49151184-49165711 Glycine max
Glyma.15G259200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 49155712-49165711 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
122314148 5265 Fabidae View MSA
124062701 5270 Rosid View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.7035 0.0 135.708 High Low
cufflinks 47.8349 0.0 151.078 High  
cufflinks 46.6852 0.0 147.802 High  
cufflinks 49.3319 0.0 157.009 High  
cufflinks 52.3033 0.0 166.971 High  
cufflinks 67.9031 0.0 229.325 High High
cufflinks 52.8323 0.0 168.908 High  
cufflinks 62.2603 0.0 207.737 High High
cufflinks 54.8299 0.0 176.982 High  
cufflinks 12.652     High  
cufflinks 15.509     High  
cufflinks 11.974     High  
cufflinks 17.922     High High
cufflinks 17.895     High High
cufflinks 9.81     High  
cufflinks 8.169     High Low
cufflinks 15.442     High  
cufflinks 12.85     High  
cufflinks 11.502     High  
cufflinks 6.274       Low
cufflinks 12.791     High  
cufflinks 7.834     High Low
cufflinks 11.414     High  
cufflinks 14.379     High  
cufflinks 6.926     High Low
cufflinks 12.176     High  

0 Strain