Gene : Glyma.15G259600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13068//PTHR13068:SF22 - CGI-12 PROTEIN-RELATED Genomic Order:  2597
Name:  ? Glyma.15G259600 Secondary Identifier:  ? PAC:30498462
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G259600 0.5kb upstream 0.5kb upstream 4852 true Chr15: 49206962-49211813 Glycine max
Glyma.15G259600 0.5kb upstream 0.5kb upstream 500 false Chr15: 49211314-49211813 Glycine max
Glyma.15G259600 0.5kb downstream 0.5kb downstream 4852 true Chr15: 49206462-49211313 Glycine max
Glyma.15G259600 0.5kb downstream 0.5kb downstream 500 false Chr15: 49206462-49206961 Glycine max
Glyma.15G259600 1.0kb upstream 1.0kb upstream 5352 true Chr15: 49206962-49212313 Glycine max
Glyma.15G259600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 49211314-49212313 Glycine max
Glyma.15G259600 1.0kb downstream 1.0kb downstream 5352 true Chr15: 49205962-49211313 Glycine max
Glyma.15G259600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 49205962-49206961 Glycine max
Glyma.15G259600 2.0kb upstream 2.0kb upstream 6352 true Chr15: 49206962-49213313 Glycine max
Glyma.15G259600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 49211314-49213313 Glycine max
Glyma.15G259600 2.0kb downstream 2.0kb downstream 6352 true Chr15: 49204962-49211313 Glycine max
Glyma.15G259600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 49204962-49206961 Glycine max
Glyma.15G259600 5.0kb upstream 5.0kb upstream 9352 true Chr15: 49206962-49216313 Glycine max
Glyma.15G259600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 49211314-49216313 Glycine max
Glyma.15G259600 5.0kb downstream 5.0kb downstream 9352 true Chr15: 49201962-49211313 Glycine max
Glyma.15G259600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 49201962-49206961 Glycine max
Glyma.15G259600 10.0kb upstream 10.0kb upstream 14352 true Chr15: 49206962-49221313 Glycine max
Glyma.15G259600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 49211314-49221313 Glycine max
Glyma.15G259600 10.0kb downstream 10.0kb downstream 14352 true Chr15: 49196962-49211313 Glycine max
Glyma.15G259600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 49196962-49206961 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305057 5265 Fabidae View MSA
124067504 5270 Rosid View MSA
123741152 5271 Pentapetalae View MSA
122793489 5272 Eudicot View MSA
122047592 5273 Angiosperm View MSA
121347961 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.5849 0.0 77.7596   High
cufflinks 9.63252 0.0 40.1628    
cufflinks 6.52011 0.0 24.8136    
cufflinks 6.65882 0.0 26.9479    
cufflinks 2.3619 0.0 8.83959    
cufflinks 1.25271 0.0 5.85018   Low
cufflinks 9.38889 0.0 30.183    
cufflinks 3.95304 0.0 18.5192    
cufflinks 1.98872 0.0 14.9068   Low
cufflinks 0.762        
cufflinks 0.18        
cufflinks 1.189        
cufflinks 0.147       Low
cufflinks 0.105       Low
cufflinks 0.534        
cufflinks 4.342       High
cufflinks 0.15       Low
cufflinks 0.973        
cufflinks 1.732        
cufflinks 5.248       High
cufflinks 0.268        
cufflinks 4.869       High
cufflinks 2.564        
cufflinks 0.203        
cufflinks 5.369       High
cufflinks 0.097       Low

0 Strain