Gene : Glyma.15G260000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11599:SF16 - PROTEASOME SUBUNIT ALPHA TYPE-2 Genomic Order:  2600
Name:  ? Glyma.15G260000 Secondary Identifier:  ? PAC:30499954
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G260000 0.5kb upstream 0.5kb upstream 11408 true Chr15: 49225920-49237327 Glycine max
Glyma.15G260000 0.5kb upstream 0.5kb upstream 500 false Chr15: 49236828-49237327 Glycine max
Glyma.15G260000 0.5kb downstream 0.5kb downstream 11408 true Chr15: 49225420-49236827 Glycine max
Glyma.15G260000 0.5kb downstream 0.5kb downstream 500 false Chr15: 49225420-49225919 Glycine max
Glyma.15G260000 1.0kb upstream 1.0kb upstream 11908 true Chr15: 49225920-49237827 Glycine max
Glyma.15G260000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 49236828-49237827 Glycine max
Glyma.15G260000 1.0kb downstream 1.0kb downstream 11908 true Chr15: 49224920-49236827 Glycine max
Glyma.15G260000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 49224920-49225919 Glycine max
Glyma.15G260000 2.0kb upstream 2.0kb upstream 12908 true Chr15: 49225920-49238827 Glycine max
Glyma.15G260000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 49236828-49238827 Glycine max
Glyma.15G260000 2.0kb downstream 2.0kb downstream 12908 true Chr15: 49223920-49236827 Glycine max
Glyma.15G260000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 49223920-49225919 Glycine max
Glyma.15G260000 5.0kb upstream 5.0kb upstream 15908 true Chr15: 49225920-49241827 Glycine max
Glyma.15G260000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 49236828-49241827 Glycine max
Glyma.15G260000 5.0kb downstream 5.0kb downstream 15908 true Chr15: 49220920-49236827 Glycine max
Glyma.15G260000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 49220920-49225919 Glycine max
Glyma.15G260000 10.0kb upstream 10.0kb upstream 20908 true Chr15: 49225920-49246827 Glycine max
Glyma.15G260000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 49236828-49246827 Glycine max
Glyma.15G260000 10.0kb downstream 10.0kb downstream 20908 true Chr15: 49215920-49236827 Glycine max
Glyma.15G260000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 49215920-49225919 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026291 5273 Angiosperm View MSA
122310573 5265 Fabidae View MSA
124069190 5270 Rosid View MSA
123746972 5271 Pentapetalae View MSA
122795211 5272 Eudicot View MSA
121350421 5274 Embryophyte View MSA
123426464 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.2777 0.0 57.2634    
cufflinks 24.2748 0.0 65.0241 High  
cufflinks 21.8774 0.0 58.7335 High  
cufflinks 27.1218 0.0 72.4486 High  
cufflinks 29.0298 0.0 77.492 High  
cufflinks 34.7324 0.0 92.7 High High
cufflinks 20.4291 0.0 55.1161   Low
cufflinks 35.6764 0.0 95.2342 High High
cufflinks 22.6855 0.0 60.8756 High  
cufflinks 2.97        
cufflinks 1.141       Low
cufflinks 2.119        
cufflinks 3.887       High
cufflinks 4.203       High
cufflinks 0.862       Low
cufflinks 1.906        
cufflinks 1.486        
cufflinks 2.54        
cufflinks 2.528        
cufflinks 1.76        
cufflinks 1.551        
cufflinks 1.99        
cufflinks 1.991        
cufflinks 1.582        
cufflinks 1.829        
cufflinks 2.251        

0 Strain