Gene : Glyma.16G021300 G. max Wm82.a2.v1

Defline:  (1 of 6) PTHR19359:SF22 - CYTOCHROME B5 ISOFORM A Genomic Order:  213
Name:  ? Glyma.16G021300 Secondary Identifier:  ? PAC:30559434

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G021300 0.5kb upstream 0.5kb upstream 5582 true Chr16: 2007977-2013558 Glycine max
Glyma.16G021300 0.5kb upstream 0.5kb upstream 500 false Chr16: 2013059-2013558 Glycine max
Glyma.16G021300 0.5kb downstream 0.5kb downstream 5582 true Chr16: 2007477-2013058 Glycine max
Glyma.16G021300 0.5kb downstream 0.5kb downstream 500 false Chr16: 2007477-2007976 Glycine max
Glyma.16G021300 1.0kb upstream 1.0kb upstream 6082 true Chr16: 2007977-2014058 Glycine max
Glyma.16G021300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2013059-2014058 Glycine max
Glyma.16G021300 1.0kb downstream 1.0kb downstream 6082 true Chr16: 2006977-2013058 Glycine max
Glyma.16G021300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2006977-2007976 Glycine max
Glyma.16G021300 2.0kb upstream 2.0kb upstream 7082 true Chr16: 2007977-2015058 Glycine max
Glyma.16G021300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2013059-2015058 Glycine max
Glyma.16G021300 2.0kb downstream 2.0kb downstream 7082 true Chr16: 2005977-2013058 Glycine max
Glyma.16G021300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2005977-2007976 Glycine max
Glyma.16G021300 5.0kb upstream 5.0kb upstream 10082 true Chr16: 2007977-2018058 Glycine max
Glyma.16G021300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2013059-2018058 Glycine max
Glyma.16G021300 5.0kb downstream 5.0kb downstream 10082 true Chr16: 2002977-2013058 Glycine max
Glyma.16G021300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2002977-2007976 Glycine max
Glyma.16G021300 10.0kb upstream 10.0kb upstream 15082 true Chr16: 2007977-2023058 Glycine max
Glyma.16G021300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2013059-2023058 Glycine max
Glyma.16G021300 10.0kb downstream 10.0kb downstream 15082 true Chr16: 1997977-2013058 Glycine max
Glyma.16G021300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1997977-2007976 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310451 5265 Fabidae View MSA
124040339 5270 Rosid View MSA
123748513 5271 Pentapetalae View MSA
122795190 5272 Eudicot View MSA
122049479 5273 Angiosperm View MSA
121350461 5274 Embryophyte View MSA
123428511 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.2203 0.0 134.543 High  
cufflinks 47.6794 0.0 181.624 High  
cufflinks 25.8341 0.0 101.119 High  
cufflinks 36.7903 0.0 129.207 High  
cufflinks 33.2476 0.0 116.707 High  
cufflinks 164.674 0.0 723.257 High High
cufflinks 28.7834 0.0 110.822 High  
cufflinks 42.2449 0.0 143.993 High  
cufflinks 29.8395 0.0 106.49 High  
cufflinks 2.868        
cufflinks 3.136        
cufflinks 2.158        
cufflinks 3.544       High
cufflinks 2.563        
cufflinks 1.006       Low
cufflinks 1.426        
cufflinks 2.446        
cufflinks 1.329        
cufflinks 4.063       High
cufflinks 0.935       Low
cufflinks 3.077        
cufflinks 1.256       Low
cufflinks 1.666        
cufflinks 3.95       High
cufflinks 1.308        
cufflinks 3.357        

0 Strain