Gene : Glyma.16G021800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24073:SF345 - RAS-RELATED PROTEIN RABA3 Genomic Order:  218
Name:  ? Glyma.16G021800 Secondary Identifier:  ? PAC:30562199
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G021800 0.5kb upstream 0.5kb upstream 2820 true Chr16: 2061646-2064465 Glycine max
Glyma.16G021800 0.5kb upstream 0.5kb upstream 500 false Chr16: 2063966-2064465 Glycine max
Glyma.16G021800 0.5kb downstream 0.5kb downstream 2820 true Chr16: 2061146-2063965 Glycine max
Glyma.16G021800 0.5kb downstream 0.5kb downstream 500 false Chr16: 2061146-2061645 Glycine max
Glyma.16G021800 1.0kb upstream 1.0kb upstream 3320 true Chr16: 2061646-2064965 Glycine max
Glyma.16G021800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2063966-2064965 Glycine max
Glyma.16G021800 1.0kb downstream 1.0kb downstream 3320 true Chr16: 2060646-2063965 Glycine max
Glyma.16G021800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2060646-2061645 Glycine max
Glyma.16G021800 2.0kb upstream 2.0kb upstream 4320 true Chr16: 2061646-2065965 Glycine max
Glyma.16G021800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2063966-2065965 Glycine max
Glyma.16G021800 2.0kb downstream 2.0kb downstream 4320 true Chr16: 2059646-2063965 Glycine max
Glyma.16G021800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2059646-2061645 Glycine max
Glyma.16G021800 5.0kb upstream 5.0kb upstream 7320 true Chr16: 2061646-2068965 Glycine max
Glyma.16G021800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2063966-2068965 Glycine max
Glyma.16G021800 5.0kb downstream 5.0kb downstream 7320 true Chr16: 2056646-2063965 Glycine max
Glyma.16G021800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2056646-2061645 Glycine max
Glyma.16G021800 10.0kb upstream 10.0kb upstream 12320 true Chr16: 2061646-2073965 Glycine max
Glyma.16G021800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2063966-2073965 Glycine max
Glyma.16G021800 10.0kb downstream 10.0kb downstream 12320 true Chr16: 2051646-2063965 Glycine max
Glyma.16G021800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2051646-2061645 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302675 5265 Fabidae View MSA
124068708 5270 Rosid View MSA
123748749 5271 Pentapetalae View MSA
122772791 5272 Eudicot View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0700252 0.0 0.283435 Low Low
cufflinks 6.44509 0.0 25.7391   High
cufflinks 0.748869 0.0 3.40034    
cufflinks 1.38048 0.0 7.39562    
cufflinks 0.695762 0.0 4.40746    
cufflinks 0.33765 0.0 1.68367    
cufflinks 1.1025 0.0 4.86982    
cufflinks 6.92814 0.0 27.0232   High
cufflinks 1.10644 0.0 6.21247    
cufflinks 0.221        
cufflinks 0.02     Low Low
cufflinks 0.716       High
cufflinks 0.039     Low Low
cufflinks 0.034     Low Low
cufflinks 0.057        
cufflinks 0.401        
cufflinks 0.149        
cufflinks 0.599       High
cufflinks 2.359       High
cufflinks 0.196        
cufflinks 0.074        
cufflinks 0.228        
cufflinks 0.443        
cufflinks 0.029     Low Low
cufflinks 0.197        
cufflinks 0.069        

0 Strain