Gene : Glyma.16G023600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31384:SF17 - AUXIN RESPONSE FACTOR 11-RELATED Genomic Order:  236
Name:  ? Glyma.16G023600 Secondary Identifier:  ? PAC:30559218
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G023600 0.5kb upstream 0.5kb upstream 5698 true Chr16: 2253326-2259023 Glycine max
Glyma.16G023600 0.5kb upstream 0.5kb upstream 500 false Chr16: 2258524-2259023 Glycine max
Glyma.16G023600 0.5kb downstream 0.5kb downstream 5698 true Chr16: 2252826-2258523 Glycine max
Glyma.16G023600 0.5kb downstream 0.5kb downstream 500 false Chr16: 2252826-2253325 Glycine max
Glyma.16G023600 1.0kb upstream 1.0kb upstream 6198 true Chr16: 2253326-2259523 Glycine max
Glyma.16G023600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2258524-2259523 Glycine max
Glyma.16G023600 1.0kb downstream 1.0kb downstream 6198 true Chr16: 2252326-2258523 Glycine max
Glyma.16G023600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2252326-2253325 Glycine max
Glyma.16G023600 2.0kb upstream 2.0kb upstream 7198 true Chr16: 2253326-2260523 Glycine max
Glyma.16G023600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2258524-2260523 Glycine max
Glyma.16G023600 2.0kb downstream 2.0kb downstream 7198 true Chr16: 2251326-2258523 Glycine max
Glyma.16G023600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2251326-2253325 Glycine max
Glyma.16G023600 5.0kb upstream 5.0kb upstream 10198 true Chr16: 2253326-2263523 Glycine max
Glyma.16G023600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2258524-2263523 Glycine max
Glyma.16G023600 5.0kb downstream 5.0kb downstream 10198 true Chr16: 2248326-2258523 Glycine max
Glyma.16G023600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2248326-2253325 Glycine max
Glyma.16G023600 10.0kb upstream 10.0kb upstream 15198 true Chr16: 2253326-2268523 Glycine max
Glyma.16G023600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2258524-2268523 Glycine max
Glyma.16G023600 10.0kb downstream 10.0kb downstream 15198 true Chr16: 2243326-2258523 Glycine max
Glyma.16G023600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2243326-2253325 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308659 5265 Fabidae View MSA
124070371 5270 Rosid View MSA
123743990 5271 Pentapetalae View MSA
122792006 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.28673 0.0 10.0424    
cufflinks 48.2905 0.0 233.135 High High
cufflinks 2.70143 0.0 9.48233    
cufflinks 4.14094 0.0 13.2312    
cufflinks 2.86526 0.0 9.9978    
cufflinks 2.50589 0.0 9.04205    
cufflinks 8.91466 0.0 26.7936    
cufflinks 2.45406 0.0 8.88758    
cufflinks 2.19305 0.0 8.224    
cufflinks 1.256        
cufflinks 0.188       Low
cufflinks 1.689        
cufflinks 0.853        
cufflinks 0.573        
cufflinks 0.35        
cufflinks 1.655        
cufflinks 0.277        
cufflinks 1.346        
cufflinks 13.116     High High
cufflinks 0.895        
cufflinks 0.274        
cufflinks 1.307        
cufflinks 2.979       High
cufflinks 0.171       Low
cufflinks 1.309        
cufflinks 0.359        

0 Strain