Gene : Glyma.16G024200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10666//PTHR10666:SF138 - UBIQUITIN Genomic Order:  242
Name:  ? Glyma.16G024200 Secondary Identifier:  ? PAC:30559094
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6351 Glycine max pathologic  
Gmax PWY-6352 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G024200 0.5kb upstream 0.5kb upstream 4174 true Chr16: 2348453-2352626 Glycine max
Glyma.16G024200 0.5kb upstream 0.5kb upstream 500 false Chr16: 2352127-2352626 Glycine max
Glyma.16G024200 0.5kb downstream 0.5kb downstream 4174 true Chr16: 2347953-2352126 Glycine max
Glyma.16G024200 0.5kb downstream 0.5kb downstream 500 false Chr16: 2347953-2348452 Glycine max
Glyma.16G024200 1.0kb upstream 1.0kb upstream 4674 true Chr16: 2348453-2353126 Glycine max
Glyma.16G024200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2352127-2353126 Glycine max
Glyma.16G024200 1.0kb downstream 1.0kb downstream 4674 true Chr16: 2347453-2352126 Glycine max
Glyma.16G024200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2347453-2348452 Glycine max
Glyma.16G024200 2.0kb upstream 2.0kb upstream 5674 true Chr16: 2348453-2354126 Glycine max
Glyma.16G024200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2352127-2354126 Glycine max
Glyma.16G024200 2.0kb downstream 2.0kb downstream 5674 true Chr16: 2346453-2352126 Glycine max
Glyma.16G024200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2346453-2348452 Glycine max
Glyma.16G024200 5.0kb upstream 5.0kb upstream 8674 true Chr16: 2348453-2357126 Glycine max
Glyma.16G024200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2352127-2357126 Glycine max
Glyma.16G024200 5.0kb downstream 5.0kb downstream 8674 true Chr16: 2343453-2352126 Glycine max
Glyma.16G024200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2343453-2348452 Glycine max
Glyma.16G024200 10.0kb upstream 10.0kb upstream 13674 true Chr16: 2348453-2362126 Glycine max
Glyma.16G024200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2352127-2362126 Glycine max
Glyma.16G024200 10.0kb downstream 10.0kb downstream 13674 true Chr16: 2338453-2352126 Glycine max
Glyma.16G024200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2338453-2348452 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313355 5265 Fabidae View MSA
124070925 5270 Rosid View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9429 0.0 37.2541    
cufflinks 9.4012 0.0 25.1452    
cufflinks 19.0821 0.0 51.6431    
cufflinks 8.37497 0.0 22.4676   Low
cufflinks 11.2702 0.0 30.0708    
cufflinks 28.3206 0.0 78.8869 High High
cufflinks 10.1378 0.0 27.0798    
cufflinks 15.0444 0.0 40.2634    
cufflinks 10.9618 0.0 29.2509    
cufflinks 10.748     High  
cufflinks 17.739     High High
cufflinks 11.884     High  
cufflinks 13.016     High  
cufflinks 8.339     High  
cufflinks 6.246     High Low
cufflinks 10.168     High  
cufflinks 15.144     High High
cufflinks 9.639     High  
cufflinks 10.317     High  
cufflinks 8.709     High  
cufflinks 10.711     High  
cufflinks 9.785     High  
cufflinks 8.477     High  
cufflinks 20.536     High High
cufflinks 8.493     High  
cufflinks 14.714     High  

0 Strain