Gene : Glyma.16G012200 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG0832 - Mitochondrial/chloroplast ribosomal protein S2 Genomic Order:  122
Name:  ? Glyma.16G012200 Secondary Identifier:  ? PAC:30561698
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G012200 0.5kb upstream 0.5kb upstream 2606 true Chr16: 1034339-1036944 Glycine max
Glyma.16G012200 0.5kb upstream 0.5kb upstream 500 false Chr16: 1034339-1034838 Glycine max
Glyma.16G012200 0.5kb downstream 0.5kb downstream 2606 true Chr16: 1034839-1037444 Glycine max
Glyma.16G012200 0.5kb downstream 0.5kb downstream 500 false Chr16: 1036945-1037444 Glycine max
Glyma.16G012200 1.0kb upstream 1.0kb upstream 3106 true Chr16: 1033839-1036944 Glycine max
Glyma.16G012200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 1033839-1034838 Glycine max
Glyma.16G012200 1.0kb downstream 1.0kb downstream 3106 true Chr16: 1034839-1037944 Glycine max
Glyma.16G012200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 1036945-1037944 Glycine max
Glyma.16G012200 2.0kb upstream 2.0kb upstream 4106 true Chr16: 1032839-1036944 Glycine max
Glyma.16G012200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 1032839-1034838 Glycine max
Glyma.16G012200 2.0kb downstream 2.0kb downstream 4106 true Chr16: 1034839-1038944 Glycine max
Glyma.16G012200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 1036945-1038944 Glycine max
Glyma.16G012200 5.0kb upstream 5.0kb upstream 7106 true Chr16: 1029839-1036944 Glycine max
Glyma.16G012200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 1029839-1034838 Glycine max
Glyma.16G012200 5.0kb downstream 5.0kb downstream 7106 true Chr16: 1034839-1041944 Glycine max
Glyma.16G012200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 1036945-1041944 Glycine max
Glyma.16G012200 10.0kb upstream 10.0kb upstream 12106 true Chr16: 1024839-1036944 Glycine max
Glyma.16G012200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 1024839-1034838 Glycine max
Glyma.16G012200 10.0kb downstream 10.0kb downstream 12106 true Chr16: 1034839-1046944 Glycine max
Glyma.16G012200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1036945-1046944 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306925 5265 Fabidae View MSA
124069184 5270 Rosid View MSA
123743040 5271 Pentapetalae View MSA
122796033 5272 Eudicot View MSA
122048402 5273 Angiosperm View MSA
121346031 5274 Embryophyte View MSA
123424876 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 84.9621 0.0 246.329 High  
cufflinks 80.4044 0.0 230.718 High  
cufflinks 34.3648 0.0 92.1383 High Low
cufflinks 76.5178 0.0 218.871 High  
cufflinks 146.96 0.0 467.007 High High
cufflinks 68.223 0.0 192.586 High  
cufflinks 141.599 0.0 447.647 High High
cufflinks 88.6761 0.0 258.819 High  
cufflinks 86.0629 0.0 249.893 High  
cufflinks 45.1     High  
cufflinks 14.389     High Low
cufflinks 33.523     High  
cufflinks 98.991     High High
cufflinks 141.568     High High
cufflinks 18.358     High  
cufflinks 35.13     High  
cufflinks 27.59     High  
cufflinks 34.424     High  
cufflinks 56.756     High  
cufflinks 24.494     High  
cufflinks 21.118     High  
cufflinks 27.034     High  
cufflinks 51.637     High  
cufflinks 15.804     High Low
cufflinks 30.079     High  
cufflinks 23.908     High  

0 Strain