Gene : Glyma.16G012300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11200:SF122 - PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED Genomic Order:  123
Name:  ? Glyma.16G012300 Secondary Identifier:  ? PAC:30561541
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G012300 0.5kb upstream 0.5kb upstream 12198 true Chr16: 1039315-1051512 Glycine max
Glyma.16G012300 0.5kb upstream 0.5kb upstream 500 false Chr16: 1051013-1051512 Glycine max
Glyma.16G012300 0.5kb downstream 0.5kb downstream 12198 true Chr16: 1038815-1051012 Glycine max
Glyma.16G012300 0.5kb downstream 0.5kb downstream 500 false Chr16: 1038815-1039314 Glycine max
Glyma.16G012300 1.0kb upstream 1.0kb upstream 12698 true Chr16: 1039315-1052012 Glycine max
Glyma.16G012300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 1051013-1052012 Glycine max
Glyma.16G012300 1.0kb downstream 1.0kb downstream 12698 true Chr16: 1038315-1051012 Glycine max
Glyma.16G012300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 1038315-1039314 Glycine max
Glyma.16G012300 2.0kb upstream 2.0kb upstream 13698 true Chr16: 1039315-1053012 Glycine max
Glyma.16G012300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 1051013-1053012 Glycine max
Glyma.16G012300 2.0kb downstream 2.0kb downstream 13698 true Chr16: 1037315-1051012 Glycine max
Glyma.16G012300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 1037315-1039314 Glycine max
Glyma.16G012300 5.0kb upstream 5.0kb upstream 16698 true Chr16: 1039315-1056012 Glycine max
Glyma.16G012300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 1051013-1056012 Glycine max
Glyma.16G012300 5.0kb downstream 5.0kb downstream 16698 true Chr16: 1034315-1051012 Glycine max
Glyma.16G012300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 1034315-1039314 Glycine max
Glyma.16G012300 10.0kb upstream 10.0kb upstream 21698 true Chr16: 1039315-1061012 Glycine max
Glyma.16G012300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 1051013-1061012 Glycine max
Glyma.16G012300 10.0kb downstream 10.0kb downstream 21698 true Chr16: 1029315-1051012 Glycine max
Glyma.16G012300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1029315-1039314 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041370 5273 Angiosperm View MSA
122316085 5265 Fabidae View MSA
124064619 5270 Rosid View MSA
123750284 5271 Pentapetalae View MSA
122786503 5272 Eudicot View MSA
121350498 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.9796 0.0 67.9701   High
cufflinks 6.30884 0.0 20.021    
cufflinks 34.4863 0.0 129.613 High High
cufflinks 6.51466 0.0 20.1769    
cufflinks 4.60829 0.0 14.3457   Low
cufflinks 22.9886 0.0 78.6647 High High
cufflinks 8.23964 0.0 25.3461    
cufflinks 6.50337 0.0 20.2179    
cufflinks 6.67354 0.0 22.9614    
cufflinks 1.931        
cufflinks 2.965        
cufflinks 5.117       High
cufflinks 1.287       Low
cufflinks 0.918       Low
cufflinks 2.177        
cufflinks 2.613        
cufflinks 2.432        
cufflinks 3.01        
cufflinks 1.648        
cufflinks 2.5        
cufflinks 3.306        
cufflinks 2.504        
cufflinks 1.875        
cufflinks 3.204        
cufflinks 2.74        
cufflinks 4.418       High

0 Strain