Gene : Glyma.16G014100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31707:SF55 - PECTINESTERASE 2-RELATED Genomic Order:  141
Name:  ? Glyma.16G014100 Secondary Identifier:  ? PAC:30561236
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G014100 0.5kb upstream 0.5kb upstream 6134 true Chr16: 1222829-1228962 Glycine max
Glyma.16G014100 0.5kb upstream 0.5kb upstream 500 false Chr16: 1228463-1228962 Glycine max
Glyma.16G014100 0.5kb downstream 0.5kb downstream 6134 true Chr16: 1222329-1228462 Glycine max
Glyma.16G014100 0.5kb downstream 0.5kb downstream 500 false Chr16: 1222329-1222828 Glycine max
Glyma.16G014100 1.0kb upstream 1.0kb upstream 6634 true Chr16: 1222829-1229462 Glycine max
Glyma.16G014100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 1228463-1229462 Glycine max
Glyma.16G014100 1.0kb downstream 1.0kb downstream 6634 true Chr16: 1221829-1228462 Glycine max
Glyma.16G014100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 1221829-1222828 Glycine max
Glyma.16G014100 2.0kb upstream 2.0kb upstream 7634 true Chr16: 1222829-1230462 Glycine max
Glyma.16G014100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 1228463-1230462 Glycine max
Glyma.16G014100 2.0kb downstream 2.0kb downstream 7634 true Chr16: 1220829-1228462 Glycine max
Glyma.16G014100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 1220829-1222828 Glycine max
Glyma.16G014100 5.0kb upstream 5.0kb upstream 10634 true Chr16: 1222829-1233462 Glycine max
Glyma.16G014100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 1228463-1233462 Glycine max
Glyma.16G014100 5.0kb downstream 5.0kb downstream 10634 true Chr16: 1217829-1228462 Glycine max
Glyma.16G014100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 1217829-1222828 Glycine max
Glyma.16G014100 10.0kb upstream 10.0kb upstream 15634 true Chr16: 1222829-1238462 Glycine max
Glyma.16G014100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 1228463-1238462 Glycine max
Glyma.16G014100 10.0kb downstream 10.0kb downstream 15634 true Chr16: 1212829-1228462 Glycine max
Glyma.16G014100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1212829-1222828 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313065 5265 Fabidae View MSA
124060766 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.85094 0.0 11.2864   Low
cufflinks 18.2432 0.0 48.7254    
cufflinks 6.46961 0.0 17.9591   Low
cufflinks 9.64964 0.0 26.0292    
cufflinks 36.6948 0.0 102.225 High  
cufflinks 27.619 0.0 75.0733 High  
cufflinks 108.006 0.0 354.163 High High
cufflinks 82.1947 0.0 255.012 High High
cufflinks 38.9335 0.0 108.817 High  
cufflinks 12.62     High  
cufflinks 7.182     High  
cufflinks 2.161       Low
cufflinks 21.118     High High
cufflinks 20.202     High High
cufflinks 1.37       Low
cufflinks 2.74        
cufflinks 7.144     High  
cufflinks 2.847        
cufflinks 16.308     High High
cufflinks 2.003       Low
cufflinks 6.453     High  
cufflinks 2.51        
cufflinks 4.67        
cufflinks 6.275     High  
cufflinks 1.956       Low
cufflinks 11.895     High  

0 Strain