Gene : Glyma.16G015400 G. max Wm82.a2.v1
Defline:  (1 of 14) PF00560//PF07714//PF08263 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  154
Name:  ? Glyma.16G015400 Secondary Identifier:  ? PAC:30558812
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G015400 0.5kb upstream 0.5kb upstream 9037 true Chr16: 1348609-1357645 Glycine max
Glyma.16G015400 0.5kb upstream 0.5kb upstream 500 false Chr16: 1348609-1349108 Glycine max
Glyma.16G015400 0.5kb downstream 0.5kb downstream 9037 true Chr16: 1349109-1358145 Glycine max
Glyma.16G015400 0.5kb downstream 0.5kb downstream 500 false Chr16: 1357646-1358145 Glycine max
Glyma.16G015400 1.0kb upstream 1.0kb upstream 9537 true Chr16: 1348109-1357645 Glycine max
Glyma.16G015400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 1348109-1349108 Glycine max
Glyma.16G015400 1.0kb downstream 1.0kb downstream 9537 true Chr16: 1349109-1358645 Glycine max
Glyma.16G015400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 1357646-1358645 Glycine max
Glyma.16G015400 2.0kb upstream 2.0kb upstream 10537 true Chr16: 1347109-1357645 Glycine max
Glyma.16G015400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 1347109-1349108 Glycine max
Glyma.16G015400 2.0kb downstream 2.0kb downstream 10537 true Chr16: 1349109-1359645 Glycine max
Glyma.16G015400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 1357646-1359645 Glycine max
Glyma.16G015400 5.0kb upstream 5.0kb upstream 13537 true Chr16: 1344109-1357645 Glycine max
Glyma.16G015400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 1344109-1349108 Glycine max
Glyma.16G015400 5.0kb downstream 5.0kb downstream 13537 true Chr16: 1349109-1362645 Glycine max
Glyma.16G015400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 1357646-1362645 Glycine max
Glyma.16G015400 10.0kb upstream 10.0kb upstream 18537 true Chr16: 1339109-1357645 Glycine max
Glyma.16G015400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 1339109-1349108 Glycine max
Glyma.16G015400 10.0kb downstream 10.0kb downstream 18537 true Chr16: 1349109-1367645 Glycine max
Glyma.16G015400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1357646-1367645 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311719 5265 Fabidae View MSA
124065018 5270 Rosid View MSA
123737395 5271 Pentapetalae View MSA
122789526 5272 Eudicot View MSA
122050311 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348233 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.22724 0.0 24.637   Low
cufflinks 23.3405 0.0 80.0686 High  
cufflinks 12.801 0.0 41.9127    
cufflinks 26.18 0.0 91.8484 High  
cufflinks 39.0145 0.0 150.048 High  
cufflinks 176.818 0.0 1481.53 High High
cufflinks 24.9876 0.0 102.692 High  
cufflinks 24.3022 0.0 84.1898 High  
cufflinks 37.3535 0.0 141.945 High  
cufflinks 3.705        
cufflinks 1.103       Low
cufflinks 1.642        
cufflinks 5.308       High
cufflinks 4.435       High
cufflinks 4.643       High
cufflinks 2.465        
cufflinks 2.238        
cufflinks 3.077        
cufflinks 3.497        
cufflinks 1.471        
cufflinks 1.839        
cufflinks 1.703        
cufflinks 1.697        
cufflinks 0.841       Low
cufflinks 1.629        
cufflinks 2.627        

0 Strain