Gene : Glyma.16G017800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11562:SF31 - RE54080P Genomic Order:  178
Name:  ? Glyma.16G017800 Secondary Identifier:  ? PAC:30561937
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G017800 0.5kb upstream 0.5kb upstream 5783 true Chr16: 1586339-1592121 Glycine max
Glyma.16G017800 0.5kb upstream 0.5kb upstream 500 false Chr16: 1591622-1592121 Glycine max
Glyma.16G017800 0.5kb downstream 0.5kb downstream 5783 true Chr16: 1585839-1591621 Glycine max
Glyma.16G017800 0.5kb downstream 0.5kb downstream 500 false Chr16: 1585839-1586338 Glycine max
Glyma.16G017800 1.0kb upstream 1.0kb upstream 6283 true Chr16: 1586339-1592621 Glycine max
Glyma.16G017800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 1591622-1592621 Glycine max
Glyma.16G017800 1.0kb downstream 1.0kb downstream 6283 true Chr16: 1585339-1591621 Glycine max
Glyma.16G017800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 1585339-1586338 Glycine max
Glyma.16G017800 2.0kb upstream 2.0kb upstream 7283 true Chr16: 1586339-1593621 Glycine max
Glyma.16G017800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 1591622-1593621 Glycine max
Glyma.16G017800 2.0kb downstream 2.0kb downstream 7283 true Chr16: 1584339-1591621 Glycine max
Glyma.16G017800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 1584339-1586338 Glycine max
Glyma.16G017800 5.0kb upstream 5.0kb upstream 10283 true Chr16: 1586339-1596621 Glycine max
Glyma.16G017800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 1591622-1596621 Glycine max
Glyma.16G017800 5.0kb downstream 5.0kb downstream 10283 true Chr16: 1581339-1591621 Glycine max
Glyma.16G017800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 1581339-1586338 Glycine max
Glyma.16G017800 10.0kb upstream 10.0kb upstream 15283 true Chr16: 1586339-1601621 Glycine max
Glyma.16G017800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 1591622-1601621 Glycine max
Glyma.16G017800 10.0kb downstream 10.0kb downstream 15283 true Chr16: 1576339-1591621 Glycine max
Glyma.16G017800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1576339-1586338 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313245 5265 Fabidae View MSA
124072009 5270 Rosid View MSA
123747462 5271 Pentapetalae View MSA
122791570 5272 Eudicot View MSA
122042960 5273 Angiosperm View MSA
121349526 5274 Embryophyte View MSA
123427530 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.4605 0.0 69.4488    
cufflinks 15.622 0.0 53.0432    
cufflinks 11.0835 0.0 41.949   Low
cufflinks 14.4742 0.0 48.8153    
cufflinks 16.3715 0.0 55.1825    
cufflinks 25.3829 0.0 93.4644 High High
cufflinks 20.4619 0.0 68.3287    
cufflinks 15.7088 0.0 58.7026    
cufflinks 17.3413 0.0 63.1372    
cufflinks 0.875        
cufflinks 0.409       Low
cufflinks 1.02        
cufflinks 1.575        
cufflinks 1.611        
cufflinks 0.283       Low
cufflinks 1.339        
cufflinks 0.556        
cufflinks 1.175        
cufflinks 1.262        
cufflinks 1.643       High
cufflinks 0.371       Low
cufflinks 1.511        
cufflinks 1.576        
cufflinks 0.514        
cufflinks 1.447        
cufflinks 0.442       Low

0 Strain