Gene : Glyma.16G008400 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.7.6.5//3.2.1.37//3.2.1.55 - GTP diphosphokinase / Stringent factor // Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Genomic Order:  84
Name:  ? Glyma.16G008400 Secondary Identifier:  ? PAC:30560191
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G008400 0.5kb upstream 0.5kb upstream 5315 true Chr16: 684997-690311 Glycine max
Glyma.16G008400 0.5kb upstream 0.5kb upstream 500 false Chr16: 689812-690311 Glycine max
Glyma.16G008400 0.5kb downstream 0.5kb downstream 5315 true Chr16: 684497-689811 Glycine max
Glyma.16G008400 0.5kb downstream 0.5kb downstream 500 false Chr16: 684497-684996 Glycine max
Glyma.16G008400 1.0kb upstream 1.0kb upstream 5815 true Chr16: 684997-690811 Glycine max
Glyma.16G008400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 689812-690811 Glycine max
Glyma.16G008400 1.0kb downstream 1.0kb downstream 5815 true Chr16: 683997-689811 Glycine max
Glyma.16G008400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 683997-684996 Glycine max
Glyma.16G008400 2.0kb upstream 2.0kb upstream 6815 true Chr16: 684997-691811 Glycine max
Glyma.16G008400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 689812-691811 Glycine max
Glyma.16G008400 2.0kb downstream 2.0kb downstream 6815 true Chr16: 682997-689811 Glycine max
Glyma.16G008400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 682997-684996 Glycine max
Glyma.16G008400 5.0kb upstream 5.0kb upstream 9815 true Chr16: 684997-694811 Glycine max
Glyma.16G008400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 689812-694811 Glycine max
Glyma.16G008400 5.0kb downstream 5.0kb downstream 9815 true Chr16: 679997-689811 Glycine max
Glyma.16G008400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 679997-684996 Glycine max
Glyma.16G008400 10.0kb upstream 10.0kb upstream 14815 true Chr16: 684997-699811 Glycine max
Glyma.16G008400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 689812-699811 Glycine max
Glyma.16G008400 10.0kb downstream 10.0kb downstream 14815 true Chr16: 674997-689811 Glycine max
Glyma.16G008400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 674997-684996 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306941 5265 Fabidae View MSA
124067255 5270 Rosid View MSA
123738848 5271 Pentapetalae View MSA
122789814 5272 Eudicot View MSA
122044078 5273 Angiosperm View MSA
121346145 5274 Embryophyte View MSA
123428478 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.1211 0.0 92.2983 High  
cufflinks 10.0432 0.0 26.794    
cufflinks 76.9033 0.0 256.803 High High
cufflinks 10.48 0.0 27.9615    
cufflinks 12.5739 0.0 33.6357    
cufflinks 20.5464 0.0 56.409    
cufflinks 9.77842 0.0 26.0887    
cufflinks 12.608 0.0 33.727    
cufflinks 12.8246 0.0 34.3267    
cufflinks 9.72     High  
cufflinks 40.081     High High
cufflinks 31.975     High  
cufflinks 6.915       Low
cufflinks 4.876       Low
cufflinks 50.761     High High
cufflinks 13.265     High  
cufflinks 31.273     High  
cufflinks 11.932     High  
cufflinks 9.478     High  
cufflinks 12.888     High  
cufflinks 37.844     High High
cufflinks 16.331     High  
cufflinks 11.158     High  
cufflinks 40.29     High High
cufflinks 12.866     High  
cufflinks 49.862     High High

0 Strain