Gene : Glyma.16G010800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21136//PTHR21136:SF89 - SNARE PROTEINS Genomic Order:  108
Name:  ? Glyma.16G010800 Secondary Identifier:  ? PAC:30561888
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G010800 0.5kb upstream 0.5kb upstream 5026 true Chr16: 940694-945719 Glycine max
Glyma.16G010800 0.5kb upstream 0.5kb upstream 500 false Chr16: 945220-945719 Glycine max
Glyma.16G010800 0.5kb downstream 0.5kb downstream 5026 true Chr16: 940194-945219 Glycine max
Glyma.16G010800 0.5kb downstream 0.5kb downstream 500 false Chr16: 940194-940693 Glycine max
Glyma.16G010800 1.0kb upstream 1.0kb upstream 5526 true Chr16: 940694-946219 Glycine max
Glyma.16G010800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 945220-946219 Glycine max
Glyma.16G010800 1.0kb downstream 1.0kb downstream 5526 true Chr16: 939694-945219 Glycine max
Glyma.16G010800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 939694-940693 Glycine max
Glyma.16G010800 2.0kb upstream 2.0kb upstream 6526 true Chr16: 940694-947219 Glycine max
Glyma.16G010800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 945220-947219 Glycine max
Glyma.16G010800 2.0kb downstream 2.0kb downstream 6526 true Chr16: 938694-945219 Glycine max
Glyma.16G010800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 938694-940693 Glycine max
Glyma.16G010800 5.0kb upstream 5.0kb upstream 9526 true Chr16: 940694-950219 Glycine max
Glyma.16G010800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 945220-950219 Glycine max
Glyma.16G010800 5.0kb downstream 5.0kb downstream 9526 true Chr16: 935694-945219 Glycine max
Glyma.16G010800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 935694-940693 Glycine max
Glyma.16G010800 10.0kb upstream 10.0kb upstream 14526 true Chr16: 940694-955219 Glycine max
Glyma.16G010800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 945220-955219 Glycine max
Glyma.16G010800 10.0kb downstream 10.0kb downstream 14526 true Chr16: 930694-945219 Glycine max
Glyma.16G010800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 930694-940693 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300389 5265 Fabidae View MSA
124065843 5270 Rosid View MSA
123753791 5271 Pentapetalae View MSA
122788214 5272 Eudicot View MSA
122046474 5273 Angiosperm View MSA
121346313 5274 Embryophyte View MSA
123424515 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.9713 0.0 61.33 High  
cufflinks 23.2304 0.0 61.9997 High  
cufflinks 15.2185 0.0 41.1454   Low
cufflinks 33.6842 0.0 90.2297 High  
cufflinks 33.5821 0.0 89.9093 High  
cufflinks 19.1697 0.0 51.3506    
cufflinks 41.6973 0.0 112.43 High High
cufflinks 33.8046 0.0 90.5619 High  
cufflinks 20.9068 0.0 55.8854 High  
cufflinks 7.482        
cufflinks 4.553        
cufflinks 4.845        
cufflinks 8.126     High High
cufflinks 10.171     High High
cufflinks 3.718       Low
cufflinks 6.233        
cufflinks 3.764       Low
cufflinks 7.995     High High
cufflinks 8.029     High High
cufflinks 5.01        
cufflinks 5.704        
cufflinks 5.743        
cufflinks 6.2        
cufflinks 5.676        
cufflinks 5.674        
cufflinks 5.199        

0 Strain