Gene : Glyma.16G003000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22880:SF174 - DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN Genomic Order:  30
Name:  ? Glyma.16G003000 Secondary Identifier:  ? PAC:30560197
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G003000 0.5kb upstream 0.5kb upstream 4684 true Chr16: 164084-168767 Glycine max
Glyma.16G003000 0.5kb upstream 0.5kb upstream 500 false Chr16: 164084-164583 Glycine max
Glyma.16G003000 0.5kb downstream 0.5kb downstream 4684 true Chr16: 164584-169267 Glycine max
Glyma.16G003000 0.5kb downstream 0.5kb downstream 500 false Chr16: 168768-169267 Glycine max
Glyma.16G003000 1.0kb upstream 1.0kb upstream 5184 true Chr16: 163584-168767 Glycine max
Glyma.16G003000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 163584-164583 Glycine max
Glyma.16G003000 1.0kb downstream 1.0kb downstream 5184 true Chr16: 164584-169767 Glycine max
Glyma.16G003000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 168768-169767 Glycine max
Glyma.16G003000 2.0kb upstream 2.0kb upstream 6184 true Chr16: 162584-168767 Glycine max
Glyma.16G003000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 162584-164583 Glycine max
Glyma.16G003000 2.0kb downstream 2.0kb downstream 6184 true Chr16: 164584-170767 Glycine max
Glyma.16G003000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 168768-170767 Glycine max
Glyma.16G003000 5.0kb upstream 5.0kb upstream 9184 true Chr16: 159584-168767 Glycine max
Glyma.16G003000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 159584-164583 Glycine max
Glyma.16G003000 5.0kb downstream 5.0kb downstream 9184 true Chr16: 164584-173767 Glycine max
Glyma.16G003000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 168768-173767 Glycine max
Glyma.16G003000 10.0kb upstream 10.0kb upstream 14184 true Chr16: 154584-168767 Glycine max
Glyma.16G003000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 154584-164583 Glycine max
Glyma.16G003000 10.0kb downstream 10.0kb downstream 14184 true Chr16: 164584-178767 Glycine max
Glyma.16G003000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 168768-178767 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304371 5265 Fabidae View MSA
124069417 5270 Rosid View MSA
123752980 5271 Pentapetalae View MSA
122795275 5272 Eudicot View MSA
122044114 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121348064 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8463 0.0 34.2991    
cufflinks 11.9407 0.0 31.9268    
cufflinks 11.0954 0.0 29.6737    
cufflinks 11.8066 0.0 31.5545    
cufflinks 10.7116 0.0 28.7252    
cufflinks 9.66048 0.0 26.0072   Low
cufflinks 14.2737 0.0 38.082    
cufflinks 18.1015 0.0 48.4154   High
cufflinks 10.3837 0.0 27.8804    
cufflinks 8.902     High  
cufflinks 3.982       Low
cufflinks 7.349     High  
cufflinks 8.434     High  
cufflinks 9.448     High High
cufflinks 5.034       Low
cufflinks 7.908     High  
cufflinks 4.1       Low
cufflinks 8.163     High  
cufflinks 8.777     High  
cufflinks 8.487     High  
cufflinks 5.567        
cufflinks 8.85     High  
cufflinks 7.819     High  
cufflinks 5.966        
cufflinks 8.199     High  
cufflinks 5.72        

0 Strain