Gene : Glyma.16G004200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21389 - P53 INDUCED PROTEIN Genomic Order:  42
Name:  ? Glyma.16G004200 Secondary Identifier:  ? PAC:30562078
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G004200 0.5kb upstream 0.5kb upstream 6917 true Chr16: 226185-233101 Glycine max
Glyma.16G004200 0.5kb upstream 0.5kb upstream 500 false Chr16: 226185-226684 Glycine max
Glyma.16G004200 0.5kb downstream 0.5kb downstream 6917 true Chr16: 226685-233601 Glycine max
Glyma.16G004200 0.5kb downstream 0.5kb downstream 500 false Chr16: 233102-233601 Glycine max
Glyma.16G004200 1.0kb upstream 1.0kb upstream 7417 true Chr16: 225685-233101 Glycine max
Glyma.16G004200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 225685-226684 Glycine max
Glyma.16G004200 1.0kb downstream 1.0kb downstream 7417 true Chr16: 226685-234101 Glycine max
Glyma.16G004200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 233102-234101 Glycine max
Glyma.16G004200 2.0kb upstream 2.0kb upstream 8417 true Chr16: 224685-233101 Glycine max
Glyma.16G004200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 224685-226684 Glycine max
Glyma.16G004200 2.0kb downstream 2.0kb downstream 8417 true Chr16: 226685-235101 Glycine max
Glyma.16G004200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 233102-235101 Glycine max
Glyma.16G004200 5.0kb upstream 5.0kb upstream 11417 true Chr16: 221685-233101 Glycine max
Glyma.16G004200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 221685-226684 Glycine max
Glyma.16G004200 5.0kb downstream 5.0kb downstream 11417 true Chr16: 226685-238101 Glycine max
Glyma.16G004200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 233102-238101 Glycine max
Glyma.16G004200 10.0kb upstream 10.0kb upstream 16417 true Chr16: 216685-233101 Glycine max
Glyma.16G004200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 216685-226684 Glycine max
Glyma.16G004200 10.0kb downstream 10.0kb downstream 16417 true Chr16: 226685-243101 Glycine max
Glyma.16G004200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 233102-243101 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300826 5265 Fabidae View MSA
124060748 5270 Rosid View MSA
123747133 5271 Pentapetalae View MSA
122786672 5272 Eudicot View MSA
122041577 5273 Angiosperm View MSA
121347072 5274 Embryophyte View MSA
123425486 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7209 0.0 38.0795    
cufflinks 7.67766 0.0 29.0941    
cufflinks 15.2035 0.0 51.2231   High
cufflinks 8.52474 0.0 31.9931    
cufflinks 7.40721 0.0 28.4485    
cufflinks 14.9387 0.0 45.2181   High
cufflinks 7.09359 0.0 27.5804   Low
cufflinks 13.5003 0.0 46.3053    
cufflinks 8.99728 0.0 33.8759    
cufflinks 1.133        
cufflinks 0.741       Low
cufflinks 1.487       High
cufflinks 1.042        
cufflinks 1.068        
cufflinks 0.658       Low
cufflinks 1.058        
cufflinks 0.971        
cufflinks 1.454       High
cufflinks 1.187        
cufflinks 1.2        
cufflinks 0.741       Low
cufflinks 1.215        
cufflinks 1.163        
cufflinks 0.931        
cufflinks 1.146        
cufflinks 1.092        

0 Strain