Gene : Glyma.16G004400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23151//PTHR23151:SF59 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Genomic Order:  44
Name:  ? Glyma.16G004400 Secondary Identifier:  ? PAC:30558875
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5173 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PYRUVDEHYD-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G004400 0.5kb upstream 0.5kb upstream 7696 true Chr16: 246827-254522 Glycine max
Glyma.16G004400 0.5kb upstream 0.5kb upstream 500 false Chr16: 246827-247326 Glycine max
Glyma.16G004400 0.5kb downstream 0.5kb downstream 7696 true Chr16: 247327-255022 Glycine max
Glyma.16G004400 0.5kb downstream 0.5kb downstream 500 false Chr16: 254523-255022 Glycine max
Glyma.16G004400 1.0kb upstream 1.0kb upstream 8196 true Chr16: 246327-254522 Glycine max
Glyma.16G004400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 246327-247326 Glycine max
Glyma.16G004400 1.0kb downstream 1.0kb downstream 8196 true Chr16: 247327-255522 Glycine max
Glyma.16G004400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 254523-255522 Glycine max
Glyma.16G004400 2.0kb upstream 2.0kb upstream 9196 true Chr16: 245327-254522 Glycine max
Glyma.16G004400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 245327-247326 Glycine max
Glyma.16G004400 2.0kb downstream 2.0kb downstream 9196 true Chr16: 247327-256522 Glycine max
Glyma.16G004400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 254523-256522 Glycine max
Glyma.16G004400 5.0kb upstream 5.0kb upstream 12196 true Chr16: 242327-254522 Glycine max
Glyma.16G004400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 242327-247326 Glycine max
Glyma.16G004400 5.0kb downstream 5.0kb downstream 12196 true Chr16: 247327-259522 Glycine max
Glyma.16G004400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 254523-259522 Glycine max
Glyma.16G004400 10.0kb upstream 10.0kb upstream 17196 true Chr16: 237327-254522 Glycine max
Glyma.16G004400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 237327-247326 Glycine max
Glyma.16G004400 10.0kb downstream 10.0kb downstream 17196 true Chr16: 247327-264522 Glycine max
Glyma.16G004400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 254523-264522 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302272 5265 Fabidae View MSA
124061053 5270 Rosid View MSA
123739083 5271 Pentapetalae View MSA
122788575 5272 Eudicot View MSA
122043289 5273 Angiosperm View MSA
121343868 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.677 0.0 102.912 High  
cufflinks 17.9394 0.0 48.0081    
cufflinks 14.0131 0.0 37.3856   Low
cufflinks 23.0196 0.0 62.2341 High  
cufflinks 47.9787 0.0 139.144 High High
cufflinks 28.6762 0.0 78.6981 High  
cufflinks 20.4013 0.0 54.8266    
cufflinks 24.4263 0.0 66.2891 High  
cufflinks 29.505 0.0 81.1716 High  
cufflinks 10.715     High  
cufflinks 5.016        
cufflinks 6.241        
cufflinks 18.886     High High
cufflinks 22.074     High High
cufflinks 4.502        
cufflinks 4.339        
cufflinks 6.151     High  
cufflinks 8.819     High  
cufflinks 6.64        
cufflinks 3.454       Low
cufflinks 7.005     High  
cufflinks 4.192        
cufflinks 6.105        
cufflinks 7.341     High  
cufflinks 3.607       Low
cufflinks 7.49     High  

0 Strain